Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1542 ATGGGGAGAAAAGGAAATTGGTTTTCTTCTGTGAAGAAAGCTCTGAGTCCTGACTCAAAGGAGAAGAAAGAGAAATCAAAGAAGAAATGGTTTGGGAAGCAGAAGTTGCAGAGTTCAGGCTCATACCAGGAATCTGATAAAGCACCACCGCTTCTGCCACCAGAAGATGTTAAATTGGCTGATCTTGAAATTGAAAGCGGTCATGATCGTGTTGTTGAAGTTGCAACTGCTGCAGATGTTGAGGAACCTGTTCCTGCTGTTGCAGTTCAGGCACCAGTGGTTAGGGCTGAAGCTGCTACTACCAGTCATACGATTACTCGGTTCTCTGGCAAACCAAAGGAAGAAGTGGCAGCAATCAAGATTCAAACGGCTTTTCGGGGATACTTGGCAAGAAGAGCACTGCGGGCTTTAAGAGGACTGGTCAGATTGAAGTCATTGATGGAAGGGCCCATTGTTAAGCGCCAAGCGATAAGTACCCTTCGCTCTATGCAGACTTTAGCTCGTGTGCAAGGTCAGATTCGTTCTCGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTGCAGCGACAGCTCTTGCAGAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGCGAGGAATGGGATGACAGCTTACAATCGAAAGAACAGATTGAAGCCAAGTTACTGGGCAAGTATGAGGCTGCTATGAGAAGAGAAAGGGCACTGGCTTATGCATTCACTCATCAGCAAAACGGGAAGAGCTCATCTAAATCTATGAATCCCATGTTCATGGATCCAACCAATCCTAGCTGGGGTTGGAGTTGGCTGGAACGATGGATGGCAGCTCGACCTTGGGAGAGCCGTGGCATGATGGATAAAGAGCTGAACGACCATTCATCCATAAAAAGCTCAAGCCGCAGCATTACCGCTGGGGAAATCAGCAAATCATTTGCTCGTTTCCAGCTAAATTCTGAAACGCACTCTCCAACGGCCAGCCAAAATCCCGGCACACCTAGCTTCCAGTCCCATTCGGCTCCTCCCAAGGCACCGGCTTCTCCAGCAGTTGCTAGGAAACTGAAGAAGGGGAGTCCAAAGGGCAGCTTGGTTTTGGAAGATGACTCCAAAAGCATGGTCAGTGTACAGTCAGACCGGTTTCGGAGGCACTCCATCGCCGGATCATCAGTGAGGGATGATGAGAGCCTTGCCAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCAAAGTCCATTAACCATGGAAAATGGGAAAACAGATAAGGGTTCCTTTGGGACTGCAAAGAAGCGTCTTTCTTTTCCGGCTTCACCTGCCAGACCACCCCGGCGGCATTCAGGTCCCCCGAAGATAATAGAAAGCAGTTTAAATGCAGAATTCGCCGTGAGCAACGGTGCGGCCAGTTGA 1437 0.4899 MGRKGNWFSSVKKALSPDSKEKKEKSKKKWFGKQKLQSSGSYQESDKAPPLLPPEDVKLADLEIESGHDRVVEVATAADVEEPVPAVAVQAPVVRAEAATTSHTITRFSGKPKEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQAISTLRSMQTLARVQGQIRSRRIRMLEENQALQRQLLQKHAKELESMRIGEEWDDSLQSKEQIEAKLLGKYEAAMRRERALAYAFTHQQNGKSSSKSMNPMFMDPTNPSWGWSWLERWMAARPWESRGMMDKELNDHSSIKSSSRSITAGEISKSFARFQLNSETHSPTASQNPGTPSFQSHSAPPKAPASPAVARKLKKGSPKGSLVLEDDSKSMVSVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKAKSRTQSQSPLTMENGKTDKGSFGTAKKRLSFPASPARPPRRHSGPPKIIESSLNAEFAVSNGAAS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1542 478 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Ahy16g1542 478 SMART iq_5 113 135 IPR000048 GO:0005515
Ahy16g1542 478 Gene3D iswi atpase 111 148 - -
Ahy16g1542 478 MobiDBLite consensus disorder prediction 318 464 - -
Ahy16g1542 478 MobiDBLite consensus disorder prediction 318 340 - -
Ahy16g1542 478 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Ahy16g1542 478 MobiDBLite consensus disorder prediction 1 54 - -
Ahy16g1542 478 PANTHER IQ-DOMAIN 5-RELATED 1 474 - -
Ahy16g1542 478 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 474 - -
Ahy16g1542 478 MobiDBLite consensus disorder prediction 390 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1542 Ahy-Chr16 35313981 35317574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1542 1 478 IQD Protein Family AT5G03040 53.550 1.87e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1542 - - gmx:100800080 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1542 16 35313981 35317574 Ahy16g1542 16 35313981 35317574 ECH