Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1537 ATGGCAACAATAGCTGTGCAAGAAATTCGACCTCCCACTCTGTCTGCAACCTCAGACCCACCACCTATCTTTGATGGAACTACCAGGTTGTACATCAGTTATTCATGCCCTTTTGCGCAGCGTGTATGGATCACTAGGAACTACAAGGGATTACAAGAAAAGATCAAATTAGTTCCTATTGACCTTCAGAACAAGCCTGCTTGGTATAAAGAGAAGGTCCACCCAGAAGGCAAGGTGCCATCTCTTGAACATGACGGCAAGATTTTGGTAGAGAGTATTGACTTGATCAAATACATAGATGTCAATTTCGAAGGACCATCTCTATATCCTAATGATCCTACCAAGAAGGAATTTGGTGACCAGCTAATTAAGTATGTCGATATTTTTACCAAAGAGATGTTTGGATCATTCAAAGGCGACCCTGTAACGCAAACAAGTGCTACATATGACTACCTGGAGAATGCTCTTGGTAAATATGAAGATGGCCCATTTTTCCTTGGTGAATTTAGCTTGGTGGACATTGCCTATATCACATTTGTTGAGAGGTTCCAACTTGTGTCATCAGAGATTTACAAGCATGACATCACTGCTGGAAGGCCTAAACTAGCTACATGGATTGAGGAGGTAAACAAGAATAACGCATATAAGCAGACAAAACCTGAAAATCCACAAGAGTTCGTTGACTTTGTCAAGAAGCGTTTCTTGGGTCAGTAG 714 0.4146 MATIAVQEIRPPTLSATSDPPPIFDGTTRLYISYSCPFAQRVWITRNYKGLQEKIKLVPIDLQNKPAWYKEKVHPEGKVPSLEHDGKILVESIDLIKYIDVNFEGPSLYPNDPTKKEFGDQLIKYVDIFTKEMFGSFKGDPVTQTSATYDYLENALGKYEDGPFFLGEFSLVDIAYITFVERFQLVSSEIYKHDITAGRPKLATWIEEVNKNNAYKQTKPENPQEFVDFVKKRFLGQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1537 237 Gene3D Glutaredoxin 1 104 - -
Ahy16g1537 237 Gene3D - 105 237 - -
Ahy16g1537 237 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Ahy16g1537 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Ahy16g1537 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 237 - -
Ahy16g1537 237 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Ahy16g1537 237 SFLD Main (cytGST) 29 211 - -
Ahy16g1537 237 SUPERFAMILY GST C-terminal domain-like 103 234 IPR036282 -
Ahy16g1537 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 237 IPR044629 GO:0004364
Ahy16g1537 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Ahy16g1537 237 SFLD Glutathione Transferase (cytosolic) 29 211 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1537 Ahy-Chr16 35088810 35091419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1537 8 235 Glutathione S-transferase Gene Family AT5G02790 67.982 5.84e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1537 K00799 - gmx:100793025 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2907 19 151765276 151767843 Ahy16g1537 16 35088810 35091419 ECH
Ahy16g1537 16 35088810 35091419 Ahy16g1537 16 35088810 35091419 ECH
Ahy16g1537 16 35088810 35091419 Ahy6g1389 6 23312728 23315179 hybridization
Ahy16g1537 16 35088810 35091419 Ahy12g1214 12 36610384 36614681 PCT
Ahy16g1537 16 35088810 35091419 Ahy2g1092 2 33249810 33253944 PCT
Ahy12g1214 12 36610384 36614681 Ahy16g1537 16 35088810 35091419 PCT
Ahy2g1092 2 33249810 33253944 Ahy16g1537 16 35088810 35091419 PCT