Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1528 ATGCAAGCACTATTTGATGAAACCCTCGTGATGAGAGTTCCGATAGTGTTTTTGGCGAGGAGGAGAGCTTGCTGCTGCGATGATAACCAACTTTACCCTCTCTCCAACTCCAATTCTCAATCCATCACTTCCTCACCCCAACCCGAAGCCCGAATCTCTTCCCTCATCTCCTCCATTTCCTCTTCTTCCTCCAAGCTTGATTCACTCCACCAACTCACTCGACTCACCAAGCGCAACTCACTCTTCCGTCACCGTCTCATCGACTCGAAAATTATCACGCTGTTACTCTCCTGTGTCGAGTCCCACGACTACAATTTTCTCCATGAGAATGCTCTCTCTTTACTTCTCAATCTCAGCCTCGATGACCACAACAAGGTTGGACTCATTGCTGAGGGAGTCGTTGCCCGCCTCGTCACCGTCATCTCCGACACCGCTGCCCGAAATCTATCCCTAAACTATCATGCCCCCGTAAGGGACGGAAATGAGAGAGAGAAGAAGGAAGCTGCGACGACCCTCTATGCTCTCTGCTCTGCTGTTGAGGTTGTTGGAGTTCTTCCAAAGTGGAAGGAAGGAAGGGAGCAGATGGAAAGGTTCCATGAATGTGTTCAGGTTCTGAGTCGGGTTCTGAGGAATGGATGA 639 0.5008 MQALFDETLVMRVPIVFLARRRACCCDDNQLYPLSNSNSQSITSSPQPEARISSLISSISSSSSKLDSLHQLTRLTKRNSLFRHRLIDSKIITLLLSCVESHDYNFLHENALSLLLNLSLDDHNKVGLIAEGVVARLVTVISDTAARNLSLNYHAPVRDGNEREKKEAATTLYALCSAVEVVGVLPKWKEGREQMERFHECVQVLSRVLRNG* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1528 212 Gene3D - 25 212 IPR011989 -
Ahy16g1528 212 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 8 38 212 - -
Ahy16g1528 212 PANTHER U BOX DOMAIN-CONTAINING 38 212 - -
Ahy16g1528 212 SUPERFAMILY ARM repeat 60 212 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1528 Ahy-Chr16 34846441 34847289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1528 35 212 U-box Gene Family AT4G21350 39.394 3.73e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1528 - - aip:107646845 375.17