Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1522 ATGTCTGACCCAACAACACAACCAACTATGCTCCCTTTCTTCAACCAATCCATGGAACTCGTCCAACTCCCCAACCCAACCGCAACCCGAATCCGAAGCCGAACCGGTTTCTCCCCCACCCTCGGCGAGCTCCTCAAACACGTAGAAGATGCTCAAAACGACAACCCTAACGCACCAACACAACATGTTCTCGATCTCAATTCTACTCCTAACTCCTCTCACCCTTTTGTTCTCTCCTTCACCAACTTAACCTACAGTGTTAAGGTCCGTCGCAAGATGATCCTGTCTCCATGCTTCACCTACTCAAACCATGACTTGCTGCCGGAGAACGACGCCACGGACGCAAAAACCGATAACGCCGCCACCAAGATTCTCCTAAATGATATCTCCGGTGAGGCGAGGGACGGCGAGATCATGGCGGTACTCGGTGCCAGTGGCTCCGGGAAGTCTACCTTGATCGACGCCCTTGCAGACCGGATCTCCAAGGAGAGCCTCAAGGGAAGTATAACGCTAAACGGAGACGTTTTGGAGTCCAGGATGTTGAAGGTTATCTCCGCTTACGTCATGCAGGACGACCTCCTCTTCCCCATGCTCACCGTGGAGGAAACCCTAATGTTCTCCGCCGAGTTCCGCCTCCCTCGCTCCCTATCCAGGTCCAAGAAGAAGGCTCGCGTTCATGCCCTCATCGACCAGCTCGGCCTCCGCAACGCCGCCACCACCGTCATCGGCGATGAAAGCCACCGCGGTGTCTCCGGAGGTGAGCGCCGACGCGTCTCCATCGGGATAGACATTATCCACGATCCGATCGTCCTCTTCCTCGACGAGCCAACCTCCGGCCTTGACTCCACCAGCGCCTTCATGGTAGTGAAGGTGCTTCAGCGAATCGCACAGAGCGGGAGCATCGTAATCATGTCAATCCACCAACCAAGCTACCGCATCCTCGGCCTCCTCGACCGCCTGATCTTCCTGTCCCACGGCCAAACCGTATTCAGCGGCTCTCCAGCGAACCTCCCGCCGTTCTTCTCAGAGTTCGGCCACCCCATACCGGAGAACGAGAACCGTACGGAGTTCGCTCTTGACTTAATCCGCGAGCTGGAAGAAGCTCCCGGCGGCACAAAAGGTCTCGTGGACTTCAATAAACAGTGGCAACTCAAGAACAAGAGAATTTCCGAGAAAACCCTCAGCGGAATACCGAAAGTGTCCCTGAAGGACGCAATCAGCGCAAGCATTTCCAGGGGTAAACTCGTCTCAGGGGCGCCAGCTGGCACCAGTACCAGTAACGACTCCAACCAACTCGCAGCGGCATCATCAGTCCACACGTTCGTGAATCCATTCTGGATCGAGATGGCGGTTATAGCAAAACGGTCTCTAACAAACTCACGGAGGATGCCCGAATTATTCGGGATCCGCTTGGGTGCAGTACTAGTGACTGGTGCCATCCTCGCCACCATGTTTTACCACCTCGATAACTCTCCCAAGGGCGTTCAGGAGCGGTTAGGGTTCTTCGCATTCGCTATGTCCACCACCTTCTACACCTGCGCTGAAGCCATCCCCGTCTTCCTCCAAGAACGCTACATCTTCATGAGAGAAACTGCCTACAATGCCTACCGCCGCTCCTCCTACGTCCTCGCTCACTCCATCATCTCCGTCCCTTCTTTAGTCTTCCTCTCCTTCGCCTTCGCCGCCACCACCTTCTGGGCGGTGGGACTCGCCGGAGGCACCACCGGCTTCCTCTTCTACTTCCTCACCATTGTGGCCAGCTTCTGGGCGGGGAGCTCCTTCGTGACGTTCCTCTCCGGCGTGGTTTCTCACGTGATGCTTGGCTTCACCGTGGTGGTTGCGATTCTAGCGTACTTTTTACTCTTCAGTGGATTCTTCATCAGCAGGGACAGAATCCCACCGTACTGGATATGGTTTCACTACATATCTCTGGTGAAGTACCCGTACGAGGGAGTGTTGCAGAACGAGTTCGATCTGAATCCACCAAGATGCTTTGTTAGAGGGACGCAGATGTTCGACAGTACGCCGCTGATGGAGGTGCCGGAGGCGTTGAAAGTGGAGCTGCTGAAGAGTATGAGCAAGACGCTGGGGATTAACATCACGAGTTCCACGTGCGTGATTACCGGAGCAGATGTGCTGAAGCAGCAGGGTGTGACGCAGCTGAGCAAGTGGAACTGCCTTTGGATAACGCTCGCTTGGGGTTTCTTCTTCCGTTTCCTTTTCTACTTGACTCTTCTTTTTGGAAGCAAGAATAGGAGAAGGTAA 2265 0.5479 MSDPTTQPTMLPFFNQSMELVQLPNPTATRIRSRTGFSPTLGELLKHVEDAQNDNPNAPTQHVLDLNSTPNSSHPFVLSFTNLTYSVKVRRKMILSPCFTYSNHDLLPENDATDAKTDNAATKILLNDISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLKGSITLNGDVLESRMLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSRSKKKARVHALIDQLGLRNAATTVIGDESHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRLIFLSHGQTVFSGSPANLPPFFSEFGHPIPENENRTEFALDLIRELEEAPGGTKGLVDFNKQWQLKNKRISEKTLSGIPKVSLKDAISASISRGKLVSGAPAGTSTSNDSNQLAAASSVHTFVNPFWIEMAVIAKRSLTNSRRMPELFGIRLGAVLVTGAILATMFYHLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISVPSLVFLSFAFAATTFWAVGLAGGTTGFLFYFLTIVASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYISLVKYPYEGVLQNEFDLNPPRCFVRGTQMFDSTPLMEVPEALKVELLKSMSKTLGINITSSTCVITGADVLKQQGVTQLSKWNCLWITLAWGFFFRFLFYLTLLFGSKNRRR* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1522 754 Pfam ABC-2 type transporter 451 657 IPR013525 GO:0016020|GO:0140359
Ahy16g1522 754 Pfam ABC transporter 126 278 IPR003439 GO:0005524
Ahy16g1522 754 Gene3D - 115 339 IPR027417 -
Ahy16g1522 754 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 36 747 - -
Ahy16g1522 754 Pfam ABC-2 type transporter 307 386 IPR043926 GO:0140359
Ahy16g1522 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 341 IPR027417 -
Ahy16g1522 754 SMART AAA_5 135 350 IPR003593 -
Ahy16g1522 754 ProSitePatterns ABC transporters family signature. 250 264 IPR017871 GO:0005524
Ahy16g1522 754 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 747 - -
Ahy16g1522 754 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 350 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1522 Ahy-Chr16 34616639 34619497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1522 125 310 Calmodulin-binding Proteins AT2G36910 30.890 1.31e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1522 K05681 - gmx:100781319 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1522 16 34616639 34619497 Ahy16g1522 16 34616639 34619497 ECH
Ahy16g1522 16 34616639 34619497 Ahy6g1372 6 22314298 22317207 hybridization