Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1489 ATGGATGGTCATACACAAAAATGGTTGGAAAAAGCGAAGCCATTCATAGGTGTGATTTTCTTGCAGTTTGGATTTGCCGGCATGGATGTTCTATCCAAGGCTGCACTCAACAAGGGAATGAGCAATTATGTTCTTGTTGTTTATCGCCATGTTGTTGCCTTCATTGTCATAACCCCCTTCGCATTAGTCATTGACAAGAAAGTGAGGCCAAAGATGACATTTTCAATCTTTATGAAGATGGTGGCACTAAGCATACTAGAGCCAGTTATTGATCAGAATTTATACTTTTTGGGAATGAAATACACAACAGCAACCTTTGCCGCTGCCATGACCAATATGCTTCCTGCCATTACCTTTGTCTTGGCCTGCATTCTTAGGCTTGAGAAGGTGAAAATAAGAAGTGTACGGAGTCAAGCAAAGGTGGTTGGGACTCTAGCAACTGTTGCAGGTGCCATGGTTATGACACTGCTTAAAGGCCCAGAGCTCTTCGGGGCCCATGGAAGCAATACCCATAACCAGCATAATAATGGGGTAAACCTTCATGATGTCATTAAGGGTTCCATCATGATCACTGTTGGCTGCTTTAGTTGGGCTTGTTTCATGGTTCTTCAATCTGTTACACTAGAAGCGTACCCTGCTGAGCTGTCACTTACATCATGGATATGCCTATTGGGAACAATTGAAGGTGGCTTAGTGGGCCTAATTATGGAAAGGGCTAATCCTTCTGCATGGACTCTACATTGGGATACAAAACTACTTGCTGCTGCCTACAGTGGCATATTTTGCTCTGGACTAGCCTATTACATTCAAGGAGTAGTCATGAAAACTAGAGGTCCAGTCTTTGTAACAGCATTTAGTCCTCTCTGTATGGTCATTGTTGCTATCATGGGCTCCATTTTTCTCGCTGAGCAAATGTTCCTTGGAAGGGTGGTTGGTGCCATTGTGATTATTTTGGGGCTGTACATGGTGGTTTGGGGCAAAAGCAAAGACTATGACTCACCAAATCCAAGTATTGAAGATAACAGTAATGCCAAAAATCAGTATCTTACTCAAGAAGGCATGAATGGTAAGGAAAACATAGCTAGAGATGAACAAGTATGA 1101 0.426 MDGHTQKWLEKAKPFIGVIFLQFGFAGMDVLSKAALNKGMSNYVLVVYRHVVAFIVITPFALVIDKKVRPKMTFSIFMKMVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFVLACILRLEKVKIRSVRSQAKVVGTLATVAGAMVMTLLKGPELFGAHGSNTHNQHNNGVNLHDVIKGSIMITVGCFSWACFMVLQSVTLEAYPAELSLTSWICLLGTIEGGLVGLIMERANPSAWTLHWDTKLLAAAYSGIFCSGLAYYIQGVVMKTRGPVFVTAFSPLCMVIVAIMGSIFLAEQMFLGRVVGAIVIILGLYMVVWGKSKDYDSPNPSIEDNSNAKNQYLTQEGMNGKENIARDEQV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1489 366 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020|GO:0016021
Ahy16g1489 366 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020|GO:0016021
Ahy16g1489 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 329 - -
Ahy16g1489 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Ahy16g1489 366 PANTHER WAT1-RELATED PROTEIN 9 344 - -
Ahy16g1489 366 PANTHER WAT1-RELATED PROTEIN 9 344 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1489 Ahy-Chr16 32278329 32282008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1489 9 363 Nodulin-like Gene Family AT2G37460 64.986 5.58e-172 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1489 - - gmx:100777050 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1489 16 32278329 32282008 Ahy16g1489 16 32278329 32282008 ECH
Ahy16g1489 16 32278329 32282008 Ahy6g1348 6 20784494 20787994 hybridization
Ahy16g1489 16 32278329 32282008 Ahy12g1156 12 30718432 30722995 PCT
Ahy16g1489 16 32278329 32282008 Ahy2g1043 2 26970568 26974998 PCT
Ahy12g1156 12 30718432 30722995 Ahy16g1489 16 32278329 32282008 PCT
Ahy2g1043 2 26970568 26974998 Ahy16g1489 16 32278329 32282008 PCT