Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1462 ATGGATTCTCATAAACTAACGGCGCTTGTTGTTGATGATGATAGGATGGTACGAATTATCCATGGAAAGATGTTGAACAGTGTTGGGGTGAAAAATCAAGTTGTGCAAAATGGTAAAGAAGCCATTAATGTTCATCTCTCTGGTCAAAGCTTTGACCTAATTCTAATGGACCTGGATATGCCTATCATGAATGGCATCGAGGCAATAAAAGAACTTCGATCAATGGGAATTTGTAGTACGATTGCTGGTGTTTCAGCACGGTCAATGGAATCACATATTCAAGAATTTATGGAAGCAGGATTAGATGAATACTTAGAGAAGCCTCTAAATATTGCTAAGCTTACTTCATTCATTCACAAATTCTATGCTACAAATTAA 378 0.3677 MDSHKLTALVVDDDRMVRIIHGKMLNSVGVKNQVVQNGKEAINVHLSGQSFDLILMDLDMPIMNGIEAIKELRSMGICSTIAGVSARSMESHIQEFMEAGLDEYLEKPLNIAKLTSFIHKFYATN* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1462 125 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 3 121 - -
Ahy16g1462 125 Gene3D - 2 125 - -
Ahy16g1462 125 CDD REC_hyHK_CKI1_RcsC-like 9 114 - -
Ahy16g1462 125 SMART REC_2 6 118 IPR001789 GO:0000160
Ahy16g1462 125 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 121 - -
Ahy16g1462 125 ProSiteProfiles Response regulatory domain profile. 7 122 IPR001789 GO:0000160
Ahy16g1462 125 SUPERFAMILY CheY-like 4 122 IPR011006 -
Ahy16g1462 125 Pfam Response regulator receiver domain 9 117 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1462 Ahy-Chr16 30221728 30222247 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1462 6 122 Response Regulator Gene Family AT3G04280 42.017 5.62e-26 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy16g1462 Response_reg 2.70E-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1462 - - rcu:8262779 164.466