Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1456 ATGAATGGGGTTCAGAACAGAAGAGTTCACAATGTTGAGAAACCTTTCCCTGGCTGCCTGGGAAGAATGGTCAACCTCTTTGATTTGACTGCTGGGGTTTCTGGAAATAGGTTACTCACTGATAAGCCACATCATGATGCTTCTTCACTTTTGAGAAGTCAATCAGATGTGGCAAGGATCACCAATCCTTCTTTTGGTGATCAATTAGAGGATAAGCTGATGGTTTCAGACTCTATGAGAGGATCTTCACAGAAGAGAATCAATGGAACACCCATCAAGATGCTCATAGACCAAGAGATGTCCAAAGAAATTGTTTCCAAGCATAATCCACCTAATGTAGTTGCCAAATTAATGGGGCTTGAAGCCCTCCCACGGGGAGAGCCTAATTTGGCCATGGAGAGAAGCTACAGAGGAGATTATTCTCAACATATGCATGGTCATTCAGGAACACCATTCAGACACTGGCAGCTGGAAGATAGATTTATGGACAAGGAAATGCTTCATGAAGGTCATCCGAGCACAGAACAGATTGCTTACAGAGATATTTATGAAATATGGCTTCAATCACAGAGAATGAACAATGTAAGAGACACGATGCCAAACGGAGAAAAGTGGACTGAAGATGTTAGTGCAAAAAAAATGGCGTTCATACGTCAGAAATTTATAGAAGCAAAACGTCTCTCTACAGATGAGAGACTGCGCCAGTCCAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCCAATAATGACCTACTAATCCGGTTATTGGATTCTCAAAATCTTTATGAGCTTCAGTCTACTCCGATTGCTGAGACTAAGCGTATTACTGTTCTTAAACCGTCGAAGATGGTTGACCGTGAAAAACCCTGTGCCAAGGGCAAGAATGATAAATATGTTAAGAAACCAACAAATATTGGCCAAGCAGCTGCTTGGGAGAAAACTAGTCCTGTGTATTCTCCAGCCAGCCAGAAAGTTGATGATTTCCCGGTTCAACCTACTCGAATAGTGGTATTGAAACCTAGCTCTGGGAAGACTCATGAGATTAAGGCTGTTCTTTCTCCGACAACTTCATCTCCTCGGAATCTGCACACTGGAAGTTTATATCACGGTCTTGAAGATTGTGATGCACTAGAGCAAACAACAAATGCAAGCGAAATCGCACAGCAAATACCTGAAAGCCTGAGGAGCCATCAAAGAGATGAAACATTGCATTCTTCAGTATTTTCCAATGGATATATCGGAGATGAAAGTTCATTTTACAAATCAGATAATGAGTATGCTGCAGGAAATTTGAGTGATTTGGAACTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGCCCTTTTTCTTCATCATCCTTCAGTCGTGCTTCCTGTTCTCCTGAGTCATCTGTTTGCCGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCAACTAAAGGTACACAAGAGCAGAGACATCTTCGGAGAAGCTCTACATTAGGTGAGATGCTCGCTCTTTCAGATATGAAGAAAGTTATAATATCTGAGGTTGAGGATATTAACAAAGACCAAGAACCTAGCAACTCTATTTCTTGCAGTCGTAATATTAGTGAAGAAATATGCATGGATGGATCTCCTAAGAATCTTCCTAGGTCAAAATCTGTCCCTGTATCTTCCACTGTCTATGAAACTGGGCCCAGCACTGAAGTTTGTGATCATGATACTAGAAAAGCACATGTCTCCAAGGAGTTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACAAATTTCTTTTTCTCAAGAAATAAGAAATCAACCAAGGAGAAGTCTTTTCTATCTCAATCCAAAGAGGAATCTCAGTCAACTCTAACTGATACGTCAGTATCTCCAGTAAATTCACGTGGAGTTAGAGATGGTGAGTCTCAAAGCTTCAACAGCGGTGCCTTTGCAGAGTGTTCTCTTCCAGCTGTATATGAATCATCCGGAAAATCACATTCAGACTCTGATGGACAAGGTGTAATATCTCTCGAGTCCACAGTGCCTGGGACATCAACAGAAAACCAGGATCAGCCTAGTCCAATCTCAGTTTTAGAACCTCCTTTTGAAGATGAGAATGCAGCTCATGGATCCTTAGACTGTATGAAGGGTGGTCAGCTGGGATCACGGCTGCTTATGAAGTCTAATTTAATTGATAAATCACCACCCATAGAATCAATAGCTCGGACCCTGTCATGGGATGACTCTTGTGCAGAGGTAGCAAGTCCCTATCCGTTAAAACCATCATTGGTCTCCCTAGACACCAAGGTGGAGGAACAAGATTGGTTTGTTCTCGTTGATAAACTACTATTGGCAGCTGGACTTGACGATCAAGTGCAGTCTGACTCATTTTACCCAAGATGGCATTCCCTTGACAGTGCTTTGGATCCATCATTGAGGGATAACTACTCCAATCCGGATGACAAGGAGTCTCAGCCTCTCCCCGAAGCCCGGCGAAGGCAGAGGAGATCCAACCAGAAGCTAGTATTTGATTGTGTCAATGTAACCCTAATGGAGATTACTGGTTATGGATCGGAGAAGTACTTAAGGTTGTGGGGTGGGAATAGTCGCTGCATGTTCCCAGTCCTGGAGGGTGCAACTCCTCCATTGGTGGACCTCATTGTGGCCCAGATGAAGGATTTAATATCTGGTGGGATGAGGTCTCTTTGGGGTGACTGTGGGGACAGTAACAGCCTGGTTGTGGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAATGAGTGGGTTGAGCTTATGGGTCTGGAGATGGATATTTTGGTTAAGGTGGTAGAGGGGAAGTTGCTGGAAGAACTTGTGGAGGATGCTGTGCTTGATTTGACAGGCAGGGCTTGA 2913 0.4325 MNGVQNRRVHNVEKPFPGCLGRMVNLFDLTAGVSGNRLLTDKPHHDASSLLRSQSDVARITNPSFGDQLEDKLMVSDSMRGSSQKRINGTPIKMLIDQEMSKEIVSKHNPPNVVAKLMGLEALPRGEPNLAMERSYRGDYSQHMHGHSGTPFRHWQLEDRFMDKEMLHEGHPSTEQIAYRDIYEIWLQSQRMNNVRDTMPNGEKWTEDVSAKKMAFIRQKFIEAKRLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSQNLYELQSTPIAETKRITVLKPSKMVDREKPCAKGKNDKYVKKPTNIGQAAAWEKTSPVYSPASQKVDDFPVQPTRIVVLKPSSGKTHEIKAVLSPTTSSPRNLHTGSLYHGLEDCDALEQTTNASEIAQQIPESLRSHQRDETLHSSVFSNGYIGDESSFYKSDNEYAAGNLSDLELMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASTKGTQEQRHLRRSSTLGEMLALSDMKKVIISEVEDINKDQEPSNSISCSRNISEEICMDGSPKNLPRSKSVPVSSTVYETGPSTEVCDHDTRKAHVSKELTKSKSMKSSFKGKVTNFFFSRNKKSTKEKSFLSQSKEESQSTLTDTSVSPVNSRGVRDGESQSFNSGAFAECSLPAVYESSGKSHSDSDGQGVISLESTVPGTSTENQDQPSPISVLEPPFEDENAAHGSLDCMKGGQLGSRLLMKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLVSLDTKVEEQDWFVLVDKLLLAAGLDDQVQSDSFYPRWHSLDSALDPSLRDNYSNPDDKESQPLPEARRRQRRSNQKLVFDCVNVTLMEITGYGSEKYLRLWGGNSRCMFPVLEGATPPLVDLIVAQMKDLISGGMRSLWGDCGDSNSLVVESVVRKEVVGNEWVELMGLEMDILVKVVEGKLLEELVEDAVLDLTGRA* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1456 970 Pfam Protein of unknown function (DUF3741) 218 261 IPR022212 -
Ahy16g1456 970 MobiDBLite consensus disorder prediction 624 653 - -
Ahy16g1456 970 MobiDBLite consensus disorder prediction 823 843 - -
Ahy16g1456 970 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 969 - -
Ahy16g1456 970 MobiDBLite consensus disorder prediction 548 574 - -
Ahy16g1456 970 MobiDBLite consensus disorder prediction 669 703 - -
Ahy16g1456 970 MobiDBLite consensus disorder prediction 617 653 - -
Ahy16g1456 970 Pfam Domain of unknown function (DUF4378) 784 961 IPR025486 -
Ahy16g1456 970 MobiDBLite consensus disorder prediction 819 843 - -
Ahy16g1456 970 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 969 - -
Ahy16g1456 970 MobiDBLite consensus disorder prediction 556 571 - -
Ahy16g1456 970 MobiDBLite consensus disorder prediction 669 719 - -
Ahy16g1456 970 Pfam DUF761-associated sequence motif 110 124 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1456 Ahy-Chr16 30024346 30029912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1456 1 967 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.662 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1456 - - var:108322999 1437.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1456 16 30024346 30029912 Ahy6g0027 6 454032 459596 hybridization
Ahy16g1456 16 30024346 30029912 Ahy12g1086 12 26308014 26313101 PCT
Ahy16g1456 16 30024346 30029912 Ahy2g0996 2 23440264 23445408 PCT
Ahy12g1086 12 26308014 26313101 Ahy16g1456 16 30024346 30029912 PCT
Ahy2g0996 2 23440264 23445408 Ahy16g1456 16 30024346 30029912 PCT