Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1439 ATGCGGAAGGATGCAAAGATACCCATTAATCAGTCTCTTCACTGCACTCGGGAGGGTTATCGAGAATCTCGTGTTAAGGCAGCAACTAGGTCAAATAGAATAACAGCCACGAGATGCAAAGCAAGAATGTATGTCATGCTGGACAGGGAGAAGGAATGTTGGGTTGTGTCCAAGGTAGAATTGAGGCATTCTCACCCCTGTTCGGCTGATAAAGCTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCCAAGTGCGTCATTACGGATAACGATGAGGCTGGCATAAGACCCAACAAGACGTATCTAGCACTTACAAACGAAGTTGGTGGGTCTTCAAACCTGAGTTTCTCAGAAAATGATGTCAGAAATTACATTACAAGCAATCTCCGATGCTCCGATGACAATGCGGACTTCAATGGGATGATGAATTATTTCGTTCGAATGAAGGAAATCAATCCCAACTTCTTTTATGCCATAGATGTTGACGATGCTAATAAATTTAGGAACGCACTCTGGGTAGATGCAAGGTGCAGGGCTTCGTATGAATATTACGGAGATGTGGTGTCGTTCAATACCACGTACAGGAGAAACAGGCATGGTCTACCGTTTGCTTCTTTTGTCGGTGTAAACCACCATGGGAAGTCAACCCTTCTTGGCTGTGCTTTACTTGGCAATGAGGAGATCCCTAGTTTTGAGTGGGTGTTCACACAGTGGGTGAGATGCATTGGGACTGCGCCAAAGGGTATCATTACTGACCAGTGCAAGGTGATGGCTGGTGCTATAAGGAAAGTCCTACCTGATACTGTCCACAGATGGTGCATTTGA 831 0.4573 MRKDAKIPINQSLHCTREGYRESRVKAATRSNRITATRCKARMYVMLDREKECWVVSKVELRHSHPCSADKAVHYHEYRELTMHAKCVITDNDEAGIRPNKTYLALTNEVGGSSNLSFSENDVRNYITSNLRCSDDNADFNGMMNYFVRMKEINPNFFYAIDVDDANKFRNALWVDARCRASYEYYGDVVSFNTTYRRNRHGLPFASFVGVNHHGKSTLLGCALLGNEEIPSFEWVFTQWVRCIGTAPKGIITDQCKVMAGAIRKVLPDTVHRWCI* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1439 276 Pfam FAR1 DNA-binding domain 8 67 IPR004330 -
Ahy16g1439 276 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 9 276 - -
Ahy16g1439 276 Pfam MULE transposase domain 189 276 IPR018289 -
Ahy16g1439 276 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 276 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1439 Ahy-Chr16 29440238 29441154 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g1439 MULE 4.30E-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1439 - - ahf:112730161 523.857