Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1433 ATGATGAATGGTGGAAGCAGCAGGAGCAGCAGGTTCCCATTCACACCATCACAGTGGCAAGAGCTTGAACACCAAGCACTCATCTACAAATACATGGCTTCCGGCATCTCCATCCCCCCTGATCTCCTCTTCTCCATCAAAAGAGGCTACCACCTTGACCACTCTAGGCTCTTCCCTCCACAACACCTTGGATGGAACTATCTGCAGATGGGTCTGGGAAGAAAGATAGACCCTGAACCAGGAAGATGCAGAAGAACCGATGGAAAAAAATGGAGATGCTCAAAGGAAGCATATCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGCAAGAACCGTTCAAGAAAGCCTGTGGAACAATCACCAGCAGCACCACCAACGAACACGGATGATGCTGCTGCTCCATCTTCTTCAACCACAACAACAATCTTATCAATCACCAACAACAATAACTCTCTCTCCCCTCTCTCATCTGCATCACTGTCCTCTCATCAACACCAACACCAACCCTCTTCAAGGTCCTCCAACTCCATTGGCTTCTCTTTTCAGGACAACAACGCTGCTCCTTTGTTTCTTGACACCCAGACCAACACCGACTGCAGAGAGAGGTATATTTATGGGCTGAAAGAGGAGGTGGATGAGCATGCTTTCTTCACTGAACCTTCGGGAACAATGAGAAGCTTCTCTGCTTCGTCCATGGATGATTCATGGCAGCTGACACCACTCACCATAAGCTCCTCAACTTCTTCGAATGAAAACAACAACGAGTACTCTTACTTGCAGCTTCACCACCATAGCTTCAACGCTGATCATAACAACAACAACTCAAAGCATCAGCAGGGTGGTGGTTGCTACATGGCTCTTGGGAAAGAAGAAAAGCCACATCATCAGAAGACCACCGTTCATCGTTTCTTCGATGAATGGCCTCACAAGAGTAGAGGAGGCTCATCCTGGCTTGATTTGGATGATAAATCTTCCACTACTCAGCTTTCCATTTCCATCCCCACATCCTCTCATGACTTCACAACCTTCATTTCAAGGAACACTAGAGATGGTTAA 1062 0.4718 MMNGGSSRSSRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFSIKRGYHLDHSRLFPPQHLGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEQSPAAPPTNTDDAAAPSSSTTTTILSITNNNNSLSPLSSASLSSHQHQHQPSSRSSNSIGFSFQDNNAAPLFLDTQTNTDCRERYIYGLKEEVDEHAFFTEPSGTMRSFSASSMDDSWQLTPLTISSSTSSNENNNEYSYLQLHHHSFNADHNNNNSKHQQGGGCYMALGKEEKPHHQKTTVHRFFDEWPHKSRGGSSWLDLDDKSSTTQLSISIPTSSHDFTTFISRNTRDG* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1433 353 MobiDBLite consensus disorder prediction 122 181 - -
Ahy16g1433 353 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy16g1433 353 PANTHER GROWTH-REGULATING FACTOR 6 9 340 - -
Ahy16g1433 353 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy16g1433 353 Pfam WRC 78 120 IPR014977 -
Ahy16g1433 353 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy16g1433 353 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Ahy16g1433 353 PANTHER - 9 340 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy16g1433 353 MobiDBLite consensus disorder prediction 104 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1433 Ahy-Chr16 29323372 29325326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1433 13 152 GRF Transcription Factor Family AT4G37740 51.064 4.92e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Ahy16g1433 WRC 7.30E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1433 - - ahf:112758812 625.55