Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1399 ATGACAACCTTCCATAAAACACGTTCTATTGTCTTTCTGGTATTTCTTGTATCTCTACTTACATTAAATACCTCAGTCGCAGCATCCCCAATAACAGAAGCACAAGAACTTGTTAAATGGAAAAATACTCTATCCCTTCCTCTTCCTTCTTCACTCAAATCATGGTCACTCAACAACTTTGACAAACTTTGCAGTTGGGAAGCCATTCTTTGTGACAAAACAAACACAACAATCACCCAAATAAACCTCTCTGATTTCTACCTCAATGGTACTCTTGATGCCTTGGCTTTTTCTTCTCTTCCAAACCTCACTTATTTCAACCTCAACGGCAACAACTTCAGTGGATCATTGCCATCTTCCATTGGAAGACTCTCCAAGCTCACTTTCTTAGACTTGGGAAACAATGTTTTTGGAGACACTTTGCCTTCAGAGCTAGGCCAGTTAAAGGAACTTCAATATCTCAGTTTTCACAACAACAATTTCATTGGCACCATTCCCTATCATCTCACAAGTCTCCCCAAGGTATGGTACCTTGACTTTGGATCAAACTACTTTGAATCTCGAAACTGGTCTCAATATTCATGCTTGCCTTCACTAACACACCTTGACTTGGATTTCAATTCATTCACCCCTGAATTTCCAAGTTTTGTGCTCAAGTGCCACAACTTAACTTTCCTTGACCTCTCCCAAAATACTTTCAATGCCACAATACCAGAATCCATGTTCACCAATTTGAGCAAGCTTGAGTACCTTAACCTCACAAACTGTGGTATGCAAGGACCACTATCACCCAATTTGTCCAAGCTCTCAAATCTCAAAGAACTTCGAATGGGAAACAACGTGTTTACTGGTCCTATTCCGGAAAACATAGTATTGATATCCGGCCTTCAGTTTCTTGAATTGAATAACATTTCAGCCCATGGGGCAATCCCTGCATCCTTAGGCCAACTCAAAGAACTCCAGCATCTTGATCTTAGCACCAACTTTTTGAATTCTTCAATCCCTTTTGAACTTGGCCTATGCAGCAATCTAACTTTTCTTGCTTTAGCAGGCAATACTTTGACTGGTTCTTTACCTTTATCATTATCCAATCTGACCAAACTTTTACAATTGGGATTATCTGAAAATTCTTTTTCTGGTCAAATTTCTGCTTCATTGATCTCAAACTGGATCGAGTTGACATCTCTGCAACTCCAAAACAATAATTTAACGGGAAGAGTTCCTCCAGAAATTGGCTTGCTCACAAAAATCAATTACCTTTTCTTGTACAATAACACAATGTCAGGTCCAATACCTGTGGAGATTGGAAACCTGAAGGAAATGATACAATTAGACCTTTCAGACAACCATTTCTCTGGTAAGATTCCTCTAACTATTTGGAATCTTACAAATATTACAATCTTGAACCTTTTCTTCAATGAGTTATCAGGGACTATTCCCAAGGATATTGGAAACTTAAAATCACTACAATATTTTGATGTCAACAACAACAAATTAAGTGGAGAGTTACCAGATACGATAGCTCAACTGCCTGCTCTAGTGCATTTTTCTGTGTTTAGCAATAAATTCTCGGGTAACATTACTCAAGAATTTGGAAAGTATAGTCCTAATTTGGATACAATCTACCTTTCAAACAACAGTTTCTCAGGAGAATTGCCACCTGACTTGTGTAATGGTACTGTGTTAACTATTTTGGCAGCCAATAACAACAGTTTTTCAGGATCTTTGCCAAAGTCTTTGAGAAATTGTTCAAGACTAGTTAAACTTCGGCTTGATGTTAATCAATTCTCTGATAACATAACAGAAGCATTTGGGGTTTATCCAAGTCTTGATTTTATCTCACTCAGTGAAAATCGTCTTGTTGGTGAGCTATCTCCAAAGTGGGGTGAATGTGTCAACCTGACCAGGATGGAAATGAGTAAAAATAAACTTTCAGGAACAATCCCCTCCGAGTTGAGTAAGCTGAGTGAACTGGCATATCTGCGTTTGGACGCCAATGAATTCACAGGCAATATCCCACCTGAAATGGGAAAACTAACCAAGCTCTTTATGTTCAACATGAGCAAGAATCATATGTCTGGAGAAGTTCCTCAAAGTATTGGCAGTTTGGCTAATCTTAATTTTCTTGATTTTTCCGACAACAATTTTATTGGAAGCATTCCTAAAGAGCTTGGTAATCTTCAAAAATTAGTAAGCCTGAATTTAAGCCATAATAATCAATCAGGGGAGATACCATCTGAACTTGGCAATCTGTTATCACTCCAGATCCTCTTGGATCTCAGCAGCAACTCTCTTACAGGAGAAATTCCTCAGAACCTTGAAAAGCTTGCAAAATTGGAGGTTCTCAATGTCTCACACAACTATTTATCTAGCCGAATCCCAGAATCTTTGGTCAACATGCTCAGCCTTGATTCCGTTGACTTTTCTTACAATAACTTGACTGGTCCAATCCCAACTGATGGTATTTTCCAAACAGCAAATGCTAAATATGAAGGAAACCCAGGTTTGTGTGGTGAGGTAAAAGGTTTACATCCATGCATTACAAACAGAAACAAATCTGGAGGAGTTGACAAAAGGGTCCTTCTTGGTGTTCTTATACCAATTTGTGGATTACTATTGGGAGTGATATGTGTTGCAATCCTTGTATGGCGACAACACCCCAAACTCAATGACGAAGAGTCCGAAAGCACTCAAACTAGTGATAAAGCTCTTAGCATTGTGTGGGGAAGGGATGGACAATTCACATTCTCTGAACTTGCCAAGGCCACTGATGACTTCAATGATAGGTATTGCATTGGAAAGGGAGGATTTGGAAGTGTTTACAAAGCAGAATTACCTACAGGTCAAGTTGTTGCTGTCAAAAGACTCAATATCTCGGACTCTATTGACATTTCACCAGTAAACCGCCAGAGCTTTGAGAACGAGATAAGAACACTGACAGGTGTGAGACACCGCAACATAATCAAGCTATATGGTTTTTGCTCAAGGAGGAAACAGATGTTCTTGGTTTACGAATATGTTGAGAAAGGAAGCTTGCGAAAAGTGCTGTATGGAGAGGAAGGAATATTGGAGCTAAGCTGGAACAAGAGGATGAAAATTGTGCAGGGAATAGCACATGCACTTGCCTACTTACACACTGATTGCTATCCGCCAGTTGTGCACAGAGATGTAACAATGAATAACATACTATTGGACTTGGACTTTGAACCTCGTCTTGCGGATTTCGGCACTGCAAAGCTTTTAAGCTCTGACGCTTCAACTTGGACCTCAGTGGCTGGTTCTTATGGCTACATGGCTCCAGAACTAGCCCAAACAATGAGGGTCACTGACAAGTGTGATGTGTATAGTTTCGGAGTGGTGGTGTTGGAGATAATAATGGGAAAACACCCTGGAGAACTCTTGACAATTCTATCCTCAAACATGTCCTTGTCATCCATGGAAGATTCACAGGTGCTTCTGAGGGATGTGTTAGACCAGAGGCTGCCACCTCCAACAGGGCAATTAGCTGAGGCAGTGGTGTTCACAGTGACCACAGCTTTGGCATGCACACGTTTGGTTCCAGAGTCCAGACCCACAATGCGTTCTGTCGCACAAGAGCTATCAGCTACTACACAGGCTTGTCTTTTGGAGCCATTTGAGATGATAACAATGAGCAAGCTTACAGGTTTCAAAAATAATAACTAG 3684 0.402 MTTFHKTRSIVFLVFLVSLLTLNTSVAASPITEAQELVKWKNTLSLPLPSSLKSWSLNNFDKLCSWEAILCDKTNTTITQINLSDFYLNGTLDALAFSSLPNLTYFNLNGNNFSGSLPSSIGRLSKLTFLDLGNNVFGDTLPSELGQLKELQYLSFHNNNFIGTIPYHLTSLPKVWYLDFGSNYFESRNWSQYSCLPSLTHLDLDFNSFTPEFPSFVLKCHNLTFLDLSQNTFNATIPESMFTNLSKLEYLNLTNCGMQGPLSPNLSKLSNLKELRMGNNVFTGPIPENIVLISGLQFLELNNISAHGAIPASLGQLKELQHLDLSTNFLNSSIPFELGLCSNLTFLALAGNTLTGSLPLSLSNLTKLLQLGLSENSFSGQISASLISNWIELTSLQLQNNNLTGRVPPEIGLLTKINYLFLYNNTMSGPIPVEIGNLKEMIQLDLSDNHFSGKIPLTIWNLTNITILNLFFNELSGTIPKDIGNLKSLQYFDVNNNKLSGELPDTIAQLPALVHFSVFSNKFSGNITQEFGKYSPNLDTIYLSNNSFSGELPPDLCNGTVLTILAANNNSFSGSLPKSLRNCSRLVKLRLDVNQFSDNITEAFGVYPSLDFISLSENRLVGELSPKWGECVNLTRMEMSKNKLSGTIPSELSKLSELAYLRLDANEFTGNIPPEMGKLTKLFMFNMSKNHMSGEVPQSIGSLANLNFLDFSDNNFIGSIPKELGNLQKLVSLNLSHNNQSGEIPSELGNLLSLQILLDLSSNSLTGEIPQNLEKLAKLEVLNVSHNYLSSRIPESLVNMLSLDSVDFSYNNLTGPIPTDGIFQTANAKYEGNPGLCGEVKGLHPCITNRNKSGGVDKRVLLGVLIPICGLLLGVICVAILVWRQHPKLNDEESESTQTSDKALSIVWGRDGQFTFSELAKATDDFNDRYCIGKGGFGSVYKAELPTGQVVAVKRLNISDSIDISPVNRQSFENEIRTLTGVRHRNIIKLYGFCSRRKQMFLVYEYVEKGSLRKVLYGEEGILELSWNKRMKIVQGIAHALAYLHTDCYPPVVHRDVTMNNILLDLDFEPRLADFGTAKLLSSDASTWTSVAGSYGYMAPELAQTMRVTDKCDVYSFGVVVLEIIMGKHPGELLTILSSNMSLSSMEDSQVLLRDVLDQRLPPPTGQLAEAVVFTVTTALACTRLVPESRPTMRSVAQELSATTQACLLEPFEMITMSKLTGFKNNN* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1399 1227 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 13 125 - -
Ahy16g1399 1227 SUPERFAMILY RNI-like 81 404 - -
Ahy16g1399 1227 Pfam Protein kinase domain 931 1197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1399 1227 SUPERFAMILY RNI-like 299 622 - -
Ahy16g1399 1227 Gene3D Transferase(Phosphotransferase) domain 1 1007 1210 - -
Ahy16g1399 1227 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 125 1220 - -
Ahy16g1399 1227 ProSiteProfiles Protein kinase domain profile. 926 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1399 1227 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 125 1220 - -
Ahy16g1399 1227 Pfam Leucine Rich Repeat 778 799 IPR001611 GO:0005515
Ahy16g1399 1227 CDD STKc_IRAK 932 1200 - -
Ahy16g1399 1227 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 13 125 - -
Ahy16g1399 1227 ProSitePatterns Protein kinases ATP-binding region signature. 932 954 IPR017441 GO:0005524
Ahy16g1399 1227 SMART LRR_typ_2 221 244 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 536 559 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 317 341 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 486 510 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 196 220 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 703 727 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 124 148 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 655 679 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 100 123 IPR003591 -
Ahy16g1399 1227 SMART LRR_typ_2 776 800 IPR003591 -
Ahy16g1399 1227 SUPERFAMILY Protein kinase-like (PK-like) 909 1200 IPR011009 -
Ahy16g1399 1227 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Ahy16g1399 1227 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1052 1064 IPR008266 GO:0004672|GO:0006468
Ahy16g1399 1227 Gene3D Ribonuclease Inhibitor 191 386 IPR032675 -
Ahy16g1399 1227 Gene3D Ribonuclease Inhibitor 515 849 IPR032675 -
Ahy16g1399 1227 Gene3D Phosphorylase Kinase; domain 1 888 1006 - -
Ahy16g1399 1227 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Ahy16g1399 1227 Gene3D Ribonuclease Inhibitor 387 507 IPR032675 -
Ahy16g1399 1227 SUPERFAMILY L domain-like 536 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1399 Ahy-Chr16 28135770 28139910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1399 1 649 Receptor kinase-like Gene Family AT4G08850 31.852 3.33e-78 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy16g1399 Pkinase 6.00E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1399 - - gmx:100809137 1664.43