Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1372 ATGGCAACTGCAACATACCCGCCGCCCCCACCATATTATAGGCTCTACAAAGATTACTTGGAGGACCCTAAGTCTGCTCCAGAGCCTCCTCCTCCCATAGAAGGGACCTACATTTGTTTTGGGGGCACCTACACTACTAGTGATGTTTTGCCAAGCTTGGAAGAACAAGGGGTGCGCCAACTCTATCCAAAGGGGGCTAATGTTGATTTCAAGAAGGAGCTGAGATCACTGAATGGAGAATTGCAGCTACACATTTTGGAGCTTGCAGATATTCTTATTGAGAGACCATCGCAGTATGCAAGGAGAGTTGAAGAGATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCCTTGCGACCTCATCAGGCAAGAGCAACATTAATTCATATTTTGGAACTTCAGATTGAGCGTCGTAAAGAAGCAGTGGAGGACATAAAGAAGAGAAGAGAAGAGGCACGAAGATTACTTAACGAGTCCCTAGCAACACTTGATGATCAATAG 507 0.4398 MATATYPPPPPYYRLYKDYLEDPKSAPEPPPPIEGTYICFGGTYTTSDVLPSLEEQGVRQLYPKGANVDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIERRKEAVEDIKKRREEARRLLNESLATLDDQ* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1372 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
Ahy16g1372 168 Coils Coil 130 164 - -
Ahy16g1372 168 Gene3D - 62 159 IPR044888 -
Ahy16g1372 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Ahy16g1372 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1372 Ahy-Chr16 27336644 27343344 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Ahy16g1372 Med7 5.50E-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1372 K15148 - gmx:100792250 294.664