Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1366 ATGAAATCGGATTATGGAAGTAATACTGCCAAATTAAAGGAGATGGGAGAGCTTTCAGCTCCCCCTGGTTTTGCATCGCTTACATCTTTCATTTTGAAAAAGGGTAAAAAGGTTACAGAAAATGACAAACGTGCAACCTGTCTGAATGAAACTAAGCACGTGCCAGTTGATGCAGACGGTAAAAACGACGTGAATGATATTGGTACATATTACCAGATTTTTAAGAATCGACCCTGGATACTCTCTGACCAGAGCAAGAGCAACGACAAACCTGAGGAGTCTCACACTGAATTTATTCCTATGGATCACTCGTCAAATGCTAGTCGTCCAAAAGGGATCACTCGTGGATGTCCAAACTGCAATAATTGTTTGAAGGTAACAGCAAGGTGGCATCCTGAGGATGCAACGAGAGAAGCCCTTGAAGAAGCTCCTCTTTTCAACCCAACAGAAGAGGAATTCAATGACACCCTCAAATATATTGCAAGCATACGATCTAGCGCAGAGCCTTATGGAATTTGTCGTATTGTACCTCCTACTCGCTGGAAACCACCATGTTCTCTTGAGGAAAAGAACTTATGGGAAGGCTCTGAATTTGTTGCTCAAATTCAACGAATAGATGGAATCCAAGTTCAGCATGCAGAAGAAAATGTGGCTAGTTCTTGTGAAGATACAAAGGCTAAGAGAAGAAGGGTGACACCAGTAGATTTGGACTCTCATCTTGCGAATGCAAGCACTTGCACCATAAATAGTCAGGGTGTTGAAGATTGTGTCTCTGAACCCTGTCCTAAATTCAGTCTCGAGACGTTTAAGAATTTTGCTGATGAATTCAAAATCCAGTACTTTGATTACAAGGGCAAGAATAAGAATGTGGGTTCTGATTTAAATTTAGCTACAAATCAACATAAGTGGGAGCCATCTGTGGAGAATATTGAGGGTGAATATGGAAGGATTGTTCAAAATCCAACTGAAAAAATTGAGGTGCTTCATGGTAACACTTTGGAGGCTGAAGGTTTTAGCAGTGGATTTCCTACAGCTGCTGATTCTGGGGAGGAACACATTTCCCCTGAATATTTGAAATCTGGATGGAACTTAAACAACATAAATTCATTGCCTGGTTCTCTTCTTTCTTTTGAAAGTTCTGGTGCTTCACATAATTTTGGTCATCGAATTCATGTTGGAATGTGCTTCACTCTGCAAAAATGGAAAGTTGAAGAGCACCACTTATACTTATTATCATACCTGCATTTGGGTGAGCCTAAAGTGTGGTATAGCATCCCACGAAGATATGCTGCCAACTATGAAACAATTAGGAAGAAGTATTTATCAGGTCTGCATGCAAGACAGCCTGATATTGATGATAATCTGATGATGCAGTTATCCTGCTTCATATTGAAGGCAGAGGGCATACCTGTATATCGCTGTGTTCAATATCCTCGTGAGTTTGTTCTTGTCTTCCCAGGAGCATATCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAATCAGTAAACTTTGCTCCTCTCGAGTGGCTTCTTCATGGACTGAATGTGGTAGAGCTATATTGTGAGAAGAGGAAAAAGACATTAATTTCGTATGATAAACTTTTGCTGGGAGGAGCAAAGGAAGCTGTAAGGGCACGATGGGAAATCGATCTGTGTATGAACGACATGACAGATAAATTAACATGTAAAGATGCGTATCAAAGAAACGGGATCTTAGCAAAAGCTCTGGATGCTCGTGTTAAGAGCGAAAGTATCAAGAGAGAATACCTATGCAGTTCTTTGAAATCACAAAGAATGGATGAAAGTTTTGACACTTGTATCAAAAGGGAATGCGGCATATGTCTGTGTGATTTACACTTGTCTGCTGTACATTGTTTGTGTTCAGAAGACAAGTTTGCGTGCCTGGATCATGCGAAACAGCTTTGTCCATGCAGTTGGAGCAACAAAATCCTCCTCTACCGTTATGAAATTAGCGAGTTGAATGTTCTTTGTCAAGCTTTGGAAGGAAAGTTAAGTGCAGTCTATAAATGGGCCAAAGAGTATCTTGGATTAAGATTTCAGTCTGTTGCCTCCAATAGATCAAAACAAATGAAACAAAACGAAGCGGCATCAGGAATCGTGGGGAATCCTCGCGGCAATTGTATTAGTTCTTTCAGCATTACCCCAAAAGAGAAGACGAAAGCAAAAGAGAAAACGTTGGGGGGCCGACCTCCTAGATCATGTGCTAATGGAGGAACCAATTCCACCAGTATCAAAACTGATATGAAGGCACCTGTGGGTAAGCCAACAACTTCAAAGAAGGTACAGCGCGATCAGAAAGTATCTACAGTTTCTTCAGTCACCAACTCACGATACTTGTCTTTTCTACAGCAAAATACATTAGTCGAAGTGCCATCTGATAGTTGCTCTTCCTCGTCCTCAGAATCTGACAATGCGTAA 2442 0.4087 MKSDYGSNTAKLKEMGELSAPPGFASLTSFILKKGKKVTENDKRATCLNETKHVPVDADGKNDVNDIGTYYQIFKNRPWILSDQSKSNDKPEESHTEFIPMDHSSNASRPKGITRGCPNCNNCLKVTARWHPEDATREALEEAPLFNPTEEEFNDTLKYIASIRSSAEPYGICRIVPPTRWKPPCSLEEKNLWEGSEFVAQIQRIDGIQVQHAEENVASSCEDTKAKRRRVTPVDLDSHLANASTCTINSQGVEDCVSEPCPKFSLETFKNFADEFKIQYFDYKGKNKNVGSDLNLATNQHKWEPSVENIEGEYGRIVQNPTEKIEVLHGNTLEAEGFSSGFPTAADSGEEHISPEYLKSGWNLNNINSLPGSLLSFESSGASHNFGHRIHVGMCFTLQKWKVEEHHLYLLSYLHLGEPKVWYSIPRRYAANYETIRKKYLSGLHARQPDIDDNLMMQLSCFILKAEGIPVYRCVQYPREFVLVFPGAYHSGFDCGFNCSESVNFAPLEWLLHGLNVVELYCEKRKKTLISYDKLLLGGAKEAVRARWEIDLCMNDMTDKLTCKDAYQRNGILAKALDARVKSESIKREYLCSSLKSQRMDESFDTCIKRECGICLCDLHLSAVHCLCSEDKFACLDHAKQLCPCSWSNKILLYRYEISELNVLCQALEGKLSAVYKWAKEYLGLRFQSVASNRSKQMKQNEAASGIVGNPRGNCISSFSITPKEKTKAKEKTLGGRPPRSCANGGTNSTSIKTDMKAPVGKPTTSKKVQRDQKVSTVSSVTNSRYLSFLQQNTLVEVPSDSCSSSSSESDNA* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1366 813 ProSiteProfiles JmjC domain profile. 359 522 IPR003347 -
Ahy16g1366 813 Pfam jmjN domain 144 177 IPR003349 -
Ahy16g1366 813 Pfam C5HC2 zinc finger 612 662 IPR004198 -
Ahy16g1366 813 PANTHER LYSINE-SPECIFIC DEMETHYLASE 91 767 - -
Ahy16g1366 813 MobiDBLite consensus disorder prediction 1 23 - -
Ahy16g1366 813 MobiDBLite consensus disorder prediction 724 777 - -
Ahy16g1366 813 Pfam JmjC domain, hydroxylase 391 505 IPR003347 -
Ahy16g1366 813 ProSiteProfiles JmjN domain profile. 143 184 IPR003349 -
Ahy16g1366 813 SUPERFAMILY Clavaminate synthase-like 259 548 - -
Ahy16g1366 813 MobiDBLite consensus disorder prediction 82 110 - -
Ahy16g1366 813 SMART cupin_9 356 522 IPR003347 -
Ahy16g1366 813 Gene3D Cupin 128 506 - -
Ahy16g1366 813 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 91 767 - -
Ahy16g1366 813 SMART JmjN_1 142 183 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1366 Ahy-Chr16 27033788 27040468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1366 19 733 JUMONJI Transcription Factor Family AT1G08620 43.502 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy16g1366 JmjC 1.10E-31 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1366 - - adu:107491746 1532.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1366 16 27033788 27040468 Ahy6g0090 6 1274922 1280925 hybridization