Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1331 ATGGCGGAGATCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCTGCCAGGCTAAGCCCTCAATCATTGCCGCCACCGGAACCGGAACCACTCCCGCCAGCTTCTCCTCCATTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCTGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGTCAAGCGCATACGCACCGACGATGACGCTTCCGCTAAGGACGACGACGTCCCCGTGGGGCCTGCCGTGGGGTCCTCAGTGGTCCCCGGAGCTCCCGCAAGGCTCTAG 336 0.6369 MAEIGHKSDGQTIEWLLCQAKPSIIAATGTGTTPASFSSISVSVRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILVKRIRTDDDASAKDDDVPVGPAVGSSVVPGAPARL* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1331 111 MobiDBLite consensus disorder prediction 44 65 - -
Ahy16g1331 111 ProSiteProfiles TCP domain profile. 1 27 IPR017887 -
Ahy16g1331 111 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 107 IPR005333 GO:0003700
Ahy16g1331 111 MobiDBLite consensus disorder prediction 85 111 - -
Ahy16g1331 111 Pfam TCP family transcription factor 3 61 IPR017887 -
Ahy16g1331 111 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 3 107 - -
Ahy16g1331 111 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1331 Ahy-Chr16 25756665 25757000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1331 3 96 TCP Transcription Factor Family AT5G23280 60.825 1.59e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy16g1331 TCP 6.40E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1331 K16221 - aip:107646651 169.859