Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1305 ATGGCTTCCGCTTATGCTTCCTCTGCCATTGCAGCTGTTGGCATCTCTAGTCCAAACACAAAAGCTTCATTCCTAAGTGGGAGGAAGTTGAAGAGGGCGGCTAAGCAGGCAGCAGGCGTTAGAGGAGTATCGAGCACAAGAGTATGTGCAGCAGCGGCTGACCCTGAGAGACCCCTGTGGTTCCCGGGAAGCACGCCTCCTCCATGGCTTGATGGCACCCTTCCTGGAGACTTTGGGTTTGATCCACTTGGTCTGGGGTCTGATCCTGAGAGCCTGAGATGGAATGTGCAGGCAGAGCTGGTGCACTGCAGGTGGGCAATGCTGGGTGCTGCGGGCATCTTCATTCCTGAATTCCTAACAAAGATTGGCGTGCTCAACACGCCATCGTGGTACACAGCTGGAGAACAGGAGTACTTCACGGACACAACCACGCTCTTCATAGTTGAGCTCATCTTCATTGGATGGGCAGAGGGAAGGAGGTGGGCTGACATCATCAAGCCAGGCTGTGTCAATACCGACCCCATTTTCCCAAACAACAAGCTCACTGGCACCGATGTTGGTTACCCCGGTGGCCTCTGGTTTGACCCTCTCGGATGGGGCACTGGCTCTCCTGAAAAGATCAAGGAATTGAGAACTAAGGAGATCAAGAATGGCAGGCTCGCCATGTTGGCTGTCATGGGTGCTTGGTTCCAGCACATCTACACCGGCACTGGTCCCATTGACAACCTCTTTGCCCACCTTGCTGATCCCGGCCATGCTACCATTTTTGCTGCTTTCACCCCCAAGTGA 789 0.5425 MASAYASSAIAAVGISSPNTKASFLSGRKLKRAAKQAAGVRGVSSTRVCAAAADPERPLWFPGSTPPPWLDGTLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1305 262 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Ahy16g1305 262 Gene3D Chlorophyll a/b binding protein domain 67 252 - -
Ahy16g1305 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 262 IPR001344 GO:0009765|GO:0016020
Ahy16g1305 262 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 262 - -
Ahy16g1305 262 SUPERFAMILY Chlorophyll a-b binding protein 50 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1305 Ahy-Chr16 25130900 25132954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1305 48 262 Chloroplast and Mitochondria Gene Families AT3G61470 91.163 1.50e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1305 K08908 - tcc:18609005 478.018