Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1303 ATGTTCAGTTTCAGAGGCGTGGATCTCGATGCACTCTTGGACATGTCCACCGATGAAGTCGTTAAGCTCTTCACTATTCGTGCTCGCAGAAGGTTTCAGCGCGGTTTGACTCACAAGCCTATGGCACTCATCAAGAAGCTGCGTAAGGCGTTTTCTAAGAAAGGCTATTCAAGAAGAGGAAGAAGAAGAAGAAAAAGAAAAACCTCCGTATGCAAATTTGGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGAACTTGCGTGTGCAAATTTGGAAGAAGAAGACATAGTAATTGTGGATTCAGGAACCTCTTCAATTGCTGGTCCAACTGTATGATATTAGACATAGTAATTTTTGTATTTTAA 366 0.4153 MFSFRGVDLDALLDMSTDEVVKLFTIRARRRFQRGLTHKPMALIKKLRKAFSKKGYSRRGRRRRKRKTSVCKFGRRRRRRRRRRRTCVCKFGRRRHSNCGFRNLFNCWSNCMILDIVIFVF* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1303 121 Gene3D 30s Ribosomal Protein S19; Chain A 1 88 IPR023575 GO:0003735|GO:0005840|GO:0006412
Ahy16g1303 121 PANTHER 40S RIBOSOMAL PROTEIN S15-6 2 54 - -
Ahy16g1303 121 MobiDBLite consensus disorder prediction 55 83 - -
Ahy16g1303 121 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 2 54 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1303 Ahy-Chr16 25013240 25016077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1303 2 50 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 85.714 1.44e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1303 K02958 - aip:107646641 174.481