Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1296 ATGCGGAAAGGACTCGGTGACGCGTTTGAGTTATGGAATTTGCGTTTTGAGTTGTTTGGTGAGCACCTAGAAGTGAATTGCTTGGAACAAGGTTTTGTCGATAGAGAGAGTAACTTCAAAGTCAAGGAGGATGAACATGAAGAACAAACTTTGATATCAAGCTTGGAGGGTAACATGCCATTCCTTCAGATGCTTCAAAGCGTGGAATCCCCTCCATTTTCTCCCTTCAAAGATCCAAACTTTCAGGCACTATTAAGACCGCAGCATCTTAAGAAACCATGGGAAGGGACGCCCTACATACCCACATTGGAATCCGAAATCAATGAATTTGAACAGTACACACGTTCAGGCAGTGATGCTGCTTGGGCTAATAAGAAGACAAACTCCCAGCATAAAGATACCAGGTTATCGAAACATCATCATCAGGAACGGGTGAGGAAGAGGAAGAGAGGAAGAGAAAGTAAAGACAAGGACAAGGAAGAGGTTGAGAACCAGCGCATGACCCACATTGCTGTGGAACGCAATAGGCGGCGCCAAATGAATGAGCATCTCAGTGTTCTAAAGTCTCTCATGCACCCTTCCTATATTCAAAGGGGTGACCATGCATCAATCATAGGGGGTGCAATAGACTTTGTGAAGGAATTGGAGCAGTTAGTTGAAACCCTTGAGGCCCAAAGAAGGATGAGAAACAAGGAAGAAGAGGATGGTGGAATGAGGTCATCAGCATCATCCAGCAGGAAAGAAGAAGCAAGTGGTGGCAATGAGGCTAAGGCAGAGAGAAGGTCAAAGGTGGGAGGCATTGAGGTGAGTGTGATTCAAAGCCATGTCAACTTGAGAATTCAGTGCGAGAAGAGAGCAGGGCTATTGATAAATGCAATCGTTGCATTGGAGAACCTAAGGCTCCCTATTCTTCATCTCAACATCACATCCTCAGATTCTTCAGTTCTCTATTCTTTCAGTCTCAAGATTGAAGAAGACAGCAAGTTAGGGTCAGCAAATGAAATTGCAGAGGCAGTTGATAAGATATTGACTTCATTAACACATTAA 1047 0.4413 MRKGLGDAFELWNLRFELFGEHLEVNCLEQGFVDRESNFKVKEDEHEEQTLISSLEGNMPFLQMLQSVESPPFSPFKDPNFQALLRPQHLKKPWEGTPYIPTLESEINEFEQYTRSGSDAAWANKKTNSQHKDTRLSKHHHQERVRKRKRGRESKDKDKEEVENQRMTHIAVERNRRRQMNEHLSVLKSLMHPSYIQRGDHASIIGGAIDFVKELEQLVETLEAQRRMRNKEEEDGGMRSSASSSRKEEASGGNEAKAERRSKVGGIEVSVIQSHVNLRIQCEKRAGLLINAIVALENLRLPILHLNITSSDSSVLYSFSLKIEEDSKLGSANEIAEAVDKILTSLTH* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1296 348 MobiDBLite consensus disorder prediction 227 242 - -
Ahy16g1296 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 232 IPR036638 GO:0046983
Ahy16g1296 348 MobiDBLite consensus disorder prediction 118 165 - -
Ahy16g1296 348 Gene3D - 162 236 IPR036638 GO:0046983
Ahy16g1296 348 PANTHER MAX DIMERIZATION, MAD 29 344 - -
Ahy16g1296 348 Coils Coil 212 235 - -
Ahy16g1296 348 MobiDBLite consensus disorder prediction 132 152 - -
Ahy16g1296 348 PANTHER TRANSCRIPTION FACTOR BHLH70 29 344 - -
Ahy16g1296 348 MobiDBLite consensus disorder prediction 227 261 - -
Ahy16g1296 348 SMART finulus 170 221 IPR011598 GO:0046983
Ahy16g1296 348 Pfam Helix-loop-helix DNA-binding domain 165 216 IPR011598 GO:0046983
Ahy16g1296 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 215 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1296 Ahy-Chr16 24651810 24667740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1296 64 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 42.136 4.00e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy16g1296 HLH 3.90E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1296 - - ahf:112759031 678.322