Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1277 ATGGAGGACATGATAATCTCTCCCTCCTCATCATCTTCTCTGGTGTCTATCCCACAAGAAAACACACCAACCCTTCAGCAAAAGCTTCACTTCCTACTCCAAAACCAGTTACCAGAATGGTGGGTCTATGGCATCTTCTGGCACACAACCAACGACGACAATGGCAATCTCTTCCTCTCCTGGGGAGACGGCCATTTCCAAGGCGCCAAAGACGCCTCCTCCCCGAGACTTATTCCTCATTACCCCATTTCAGCGACGGACAGATGCAGAAAGTTCAACAACAGCAACAATAACAATGACGGAGAATGGTTCTACGTGATGTCTTTGACACGCACCTTTCCTATGGGCGAAGCTTCATATTCTTCGCTACCCGGGAAGGCCTTTGGTTCGGGGTCTCCCATCTGGCTCAACGGGGACCTTCAATTCTGCGACTGTGACAGAGCTAAAGAAGCTTACATGCATGGCATTCGAACTCTCGTACACATTCCAACCACAGATGGCGTTCTTGAAATGGGTTCCTACGATCTCATCACTGAAAACTGGACTCTCCTTCAACAAACCAAGTCCCTCTTTGGATCGCAACACCAGCAACTCAATCCTATACAGTTCTTCGACGACCAGAACATCTCCTTCGCTGACATTGGCATTATCGCCGGCGTTCAAGAAGAAGAAAACTCACACGAAGAAGATGCCGTCAGAAAGAGAAAGGAAACGGAGGCACTCAACAACAAGAAAAAGAATAAGGATCACTCGTCAATGGGGAAGTTTGGATCATCGCGTCAATCGTCCTTCGTGGATTCGGAGCATTCAGACTCGGACTGTGGTGCACCAATGGCGGCAGCAGAGAAGAGGTTGCCGAAGAAGAGAGGGAGGAAACCAGGGATAGGGCGTGAAACCCCGCTGAACCACGTGGAGGCAGAGCGGCAGCGGAGGGAGAAGCTCAACCACCGGTTCTATGCTCTGAGGGCGGTGGTTCCAAACGTGTCAAGGATGGACAAGGCTTCTTTGCTTTCCGACGCGGTGTCTTACATCAACGAGCTGAAGGCAAAGATCGAAGAGTTAGAGACTCAGGTTCAGAAGGAGTCATCGATCAACAACAATAATAAGAAGGTGAAGGTTGAAACTGGCGACAGCATGGACAACCAGAGCACCACCACAACCTCCTCCGTGGACCAAAACAATAACGAGAATGAGGCGGCAGAGGTGCAGGTCGAGGTGGAGGTGGAGGTGAAGATGATAGGAGAAGAGGCGGCGATGGTGAGGGTTCAGTCGGAGAGTGGGACCCACCCTGGTGCGAAACTGTTGAATGCATTGCGGGAATTGGAGTTTCAAGTGCAGCATGGAAGCATTTGGTGCGTCAACGAGAGCAGCATCATGCTCCAACACGTTCTTGTGAAGCTTCCAGAAGGGATCACGATGAGAACTGAACAAGCGCTTAAATCTGCCATTCTAAGCAGATTATTGGATCATCATAATCAGTAA 1482 0.5007 MEDMIISPSSSSSLVSIPQENTPTLQQKLHFLLQNQLPEWWVYGIFWHTTNDDNGNLFLSWGDGHFQGAKDASSPRLIPHYPISATDRCRKFNNSNNNNDGEWFYVMSLTRTFPMGEASYSSLPGKAFGSGSPIWLNGDLQFCDCDRAKEAYMHGIRTLVHIPTTDGVLEMGSYDLITENWTLLQQTKSLFGSQHQQLNPIQFFDDQNISFADIGIIAGVQEEENSHEEDAVRKRKETEALNNKKKNKDHSSMGKFGSSRQSSFVDSEHSDSDCGAPMAAAEKRLPKKRGRKPGIGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINELKAKIEELETQVQKESSINNNNKKVKVETGDSMDNQSTTTTSSVDQNNNENEAAEVQVEVEVEVKMIGEEAAMVRVQSESGTHPGAKLLNALRELEFQVQHGSIWCVNESSIMLQHVLVKLPEGITMRTEQALKSAILSRLLDHHNQ* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1277 493 Gene3D - 296 363 IPR036638 GO:0046983
Ahy16g1277 493 Pfam Helix-loop-helix DNA-binding domain 302 347 IPR011598 GO:0046983
Ahy16g1277 493 MobiDBLite consensus disorder prediction 356 400 - -
Ahy16g1277 493 Coils Coil 337 364 - -
Ahy16g1277 493 MobiDBLite consensus disorder prediction 222 253 - -
Ahy16g1277 493 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 298 347 IPR011598 GO:0046983
Ahy16g1277 493 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 298 360 IPR036638 GO:0046983
Ahy16g1277 493 MobiDBLite consensus disorder prediction 292 309 - -
Ahy16g1277 493 PANTHER TRANSCRIPTION FACTOR BHLH14 1 487 - -
Ahy16g1277 493 CDD bHLH_AtAIB_like 296 360 - -
Ahy16g1277 493 MobiDBLite consensus disorder prediction 222 309 - -
Ahy16g1277 493 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 191 IPR025610 -
Ahy16g1277 493 SMART finulus 304 353 IPR011598 GO:0046983
Ahy16g1277 493 MobiDBLite consensus disorder prediction 254 269 - -
Ahy16g1277 493 PANTHER MYC 1 487 IPR045084 GO:0003700|GO:0006355
Ahy16g1277 493 MobiDBLite consensus disorder prediction 358 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1277 Ahy-Chr16 23913475 23915720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1277 1 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 32.815 7.59e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy16g1277 bHLH-MYC_N 4.40E-41 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1277 - K13422 adu:107491832 921.768