Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1258 ATGCCTGCAATGGTCATACTCTTGGTAGCCCTCGCCGTTCTGCTCCTCTTCTTCTCCTTCTCCAAGAAGCTATGGAGGGGCGTGGAAGACTGGTTCCACGTGTACCAGTTCTTGAAGGTCCCACAGCACAACCACACAACCTTGCAGGAGAATCATCTCTACAGAAAGGTCTCCCTCTACTTGCATTCTCTCCCTTCCATCGAAGACTCTGATTTCACAACACTCCTTACTGGCAAGAAGTATAACGACATCCTTCTCTGCCTCGGCCCCGACCAAACCATTCAGGACCGTTTTCTCGGAGCCACCGTCTTCTGGCACAACCAAACCGACGTCGACGACGGTGCTGATCAGAATCCCCAATTCAATCGCGCCAGAGCCTTCGTTCTCAAGATAAGAAAAGTGGACAAACGCCGAATCCTCCGCCCCTACCTTCAGCACATTCACGCCGTCGCCGACGATATTGAGCAGCAAGGGAACCGCGATCTGCGGCTATTCATGAACACCGCTGCCGCTGCACAGGGAAGAGGAAGGTGGAGATCAGTTCCTTTTACCCACCCCTGCACCTTTGAAACCCTTGCCATGGAGTCCGATCTCAAGAACCGGGTGAAATCCGACCTCGAATCGTTCCTCAGGGCGAAGCAGTACTACAACCGGCTTGGCCGAGTGTGGAAACGGAGCTTCCTCTTATACGGTCCTTCCGGAACCGGAAAATCGAGCTTCGTCGCTGCCATGGCCAATTTCCTTCGCTACGACGTGTATGACATCGACCTCTCCAAGGTTCCCAGCGATTCGGATCTGAAACTGCTCCTACTACAGACGACGCCGAAATCAGTGGTAGTGGTGGAGGACCTCGACCGGTTCCTGGCGGAGAAATCCACGGCGGTGAGCTCTTCAGGGATGCTGAACTTTATGGACGGAGTAGTGAGCTCGTGCTGTGGCGAGGAGAAGGTGATGGTGTTCACGATGAACAGCAAGGAACACGTGGATCCGAACCTTCTTCGGCCGGGTCGGGTCGACGTTCACATCCACTTTCCCTTGTGCGATTTCACGGCGTTCAAGACGATGGCGAATAACTACCTTGGAGTGAAGGAGCACAAGCTGTTCCCTCAGGTTCAAGAGATTTTCCAGAACGGCGCGAGTCTCAGCCCCGCCGAGATCGGCGAGTTGATGATCGCTAACCGAAACTCACCGAGTCGGGCCATCAAATCGGTGATCACCGCCTTACAAACGGACGGCGATGGGAGAGGGTCCGGGAGTCCGATCGTACGGCATACAGGGGAGGATGACGTGGACGAACCTGACGCTGTTATGTGTGGTGAGGGTCTCCACACGGTTAAGGATTTGCGTAAATTGTACGGCTTTTTCAGGTTGAAGAATACCAGAAGATCCCCCTCCTCCAACACCAGCTCAATGCCCAGCCCCTTGAGATGA 1431 0.5437 MPAMVILLVALAVLLLFFSFSKKLWRGVEDWFHVYQFLKVPQHNHTTLQENHLYRKVSLYLHSLPSIEDSDFTTLLTGKKYNDILLCLGPDQTIQDRFLGATVFWHNQTDVDDGADQNPQFNRARAFVLKIRKVDKRRILRPYLQHIHAVADDIEQQGNRDLRLFMNTAAAAQGRGRWRSVPFTHPCTFETLAMESDLKNRVKSDLESFLRAKQYYNRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLRYDVYDIDLSKVPSDSDLKLLLLQTTPKSVVVVEDLDRFLAEKSTAVSSSGMLNFMDGVVSSCCGEEKVMVFTMNSKEHVDPNLLRPGRVDVHIHFPLCDFTAFKTMANNYLGVKEHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIKSVITALQTDGDGRGSGSPIVRHTGEDDVDEPDAVMCGEGLHTVKDLRKLYGFFRLKNTRRSPSSNTSSMPSPLR* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1258 476 Gene3D - 180 343 IPR027417 -
Ahy16g1258 476 PANTHER BCS1 AAA-TYPE ATPASE 6 432 - -
Ahy16g1258 476 Pfam ATPase family associated with various cellular activities (AAA) 228 346 IPR003959 GO:0005524|GO:0016887
Ahy16g1258 476 SMART AAA_5 223 348 IPR003593 -
Ahy16g1258 476 MobiDBLite consensus disorder prediction 410 432 - -
Ahy16g1258 476 PANTHER BNAC04G00800D PROTEIN 6 432 - -
Ahy16g1258 476 Pfam Domain associated at C-terminal with AAA 22 106 IPR025753 -
Ahy16g1258 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 407 IPR027417 -
Ahy16g1258 476 CDD AAA 224 346 - -
Ahy16g1258 476 Gene3D - 344 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1258 Ahy-Chr16 23373499 23375553 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1258 - K08900 gmx:100805212 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1258 16 23373499 23375553 Ahy6g0168 6 2078871 2080839 hybridization
Ahy16g1258 16 23373499 23375553 Ahy12g0371 12 5329037 5331280 PCT
Ahy16g1258 16 23373499 23375553 Ahy2g0345 2 4340035 4342077 PCT
Ahy12g0371 12 5329037 5331280 Ahy16g1258 16 23373499 23375553 PCT
Ahy2g0345 2 4340035 4342077 Ahy16g1258 16 23373499 23375553 PCT