Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1248 ATGGATTCTGATTCTGTGTTGGCATTGCCTGAGAGCAATGGATTCAAAACAAGGGACAGTCATGATTTTGAGGAAGACTTTGTAGAGAAAGATCCTACCGGCCGCTATCTTAGATACAATGAAATGTTGGGCAAGGGTGCTTTCAAGACTGTTTATAGGGGCTTTGATGAAGTTGACGGATTAGAAGTTGCTTGGAACCAAGTCAGGATTGATGAACTCCTGGGATCTGCAGATGACGTTGCAAAGTTGTACTCCGAAGTAAACCTATTGAAGTCTGTGAACCACGAAAACATCATTAAGTTCTATAATTCTTGGATTGATGATAAGAAGAAAACTGTTAACATTATTACTGAGCTCTTCACATCTGGAAACCTAAGACAATACCGGAAGAAGCACAGATATGTTGACATGAAAGCCATAAAAGGTTGGGCTCGACAAATTCTTCAAGGTCTGGTATATCTTCACGGTCACAAGCCGCCTATTATTCACAGAGACTTGAAATGTGATAACATCTTTGTAAATGGGAACCATGGAGAAGTCAAGATCGGAGATCTCGGTTTGGCAACTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACGCCCGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTCGTGGATGTCTATTCTTTTGGGATGTGCATGTTGGAAATGGTTACTTTTGAGTACCCATATAGCGAATGCAAGAATCCAGCTCAAATTTACAAGAAAGTTACCTCTGGCATCAAACCGAATTCCCTTAACAGGGTGAGTGATCCCCAAATTAAGGAGTTTATCAACAAATGTCTTGTTCCTGCATCTGAGAGGTTGTCTGCAGAGGAGCTTCTTAAAGATCCATTTCTGCAAGTCGAGTGTTCCAAGGATCCAATCCTTAATCCCTTAAACTCACCTAATAAATCTCCAAAGGCTATAGATAGGCCGAAATCTGGTCCTTTATCTATAGACTTCGAGGCTGACTCCAAACATGTGTCTGTGTTTACCTGTGCTGAAAACAGCCATGGAAGTTCACATTGTCCACTTCTGGAAGTTCGGCGTACATATAAAAACAATGAGTTTAAATTGAAAGGGACCAAAAATGATGATAACTCGGTGTCATTAATCTTGCGTATTGCTGATTCTTGCGGTCAAGTAAGGAATATACATTTCCTCTTCTACCTTGAGACAGATACTGCAGTTTCTGTGGCATCAGAGATGGTTGAAAATTTGGAGCTGCCCGATCATGATGTAGCCTTCATAGCTGAGCTTATTGATTACTTGATAATGAAGCTATTACCTCAGTGTAAGCCGTCGAATGAAGGAAATAGTCATAGTCAGTGTCCTGTGCCAAGCAGTGCTCGCACTGAAGTGATTTTTTATCAAGACAACGCACAGTGTCCTGTCCAAACCAATGCTCCCTCTGAATTGGTTTTCAATCAAGAGAACTCGACTCCAGTTGATTCTAACCAAGCAGAAGATTTTGATACAGCCAACAGAAGCTTCGTGTTTAACAATGGTGATAATGCTGCTTTTGTTGGTGAGTATAATTCTTCTCTGAGTTTGAGTAGCTTGGAAGATCAAGATTGGCAAGAACCGGCAGAGGCTGATATAGCCATTGAAGATGCTTGCACGAAAAATGAATACTGTCTTGATTCTGATGCTGATAGGAGTGAGAAGGGATTAAGTTGGTCAACCTTAGAAATGAAGCTGGCTGATACATTCTGGGAATGTTGTAAATTGCAGGCTACAAACTGTGCTGCCGAAAGCATTGTACTGAAAGGAATCTCAAAGAACTCTTCTCACTCTACAATCCCAGCCTTTTGGGGAACACCTAATGCTTTGAGCTTGACAAGCAGCAATTCTTCTTTGTCTCCAACCGACAAAGACATCGATCACGAGCTAGAGCATGAACTCGATGCGATCGAATCACACTATGAGCTTTGGTTCCAAGAACTTTCAAGACAGAAGTTGGAAGCATTGGAAGCCACCAGAAAGAAATGGACAGAAAGGAAGAAACTGATTGTTCATTGA 2046 0.4145 MDSDSVLALPESNGFKTRDSHDFEEDFVEKDPTGRYLRYNEMLGKGAFKTVYRGFDEVDGLEVAWNQVRIDELLGSADDVAKLYSEVNLLKSVNHENIIKFYNSWIDDKKKTVNIITELFTSGNLRQYRKKHRYVDMKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIKPNSLNRVSDPQIKEFINKCLVPASERLSAEELLKDPFLQVECSKDPILNPLNSPNKSPKAIDRPKSGPLSIDFEADSKHVSVFTCAENSHGSSHCPLLEVRRTYKNNEFKLKGTKNDDNSVSLILRIADSCGQVRNIHFLFYLETDTAVSVASEMVENLELPDHDVAFIAELIDYLIMKLLPQCKPSNEGNSHSQCPVPSSARTEVIFYQDNAQCPVQTNAPSELVFNQENSTPVDSNQAEDFDTANRSFVFNNGDNAAFVGEYNSSLSLSSLEDQDWQEPAEADIAIEDACTKNEYCLDSDADRSEKGLSWSTLEMKLADTFWECCKLQATNCAAESIVLKGISKNSSHSTIPAFWGTPNALSLTSSNSSLSPTDKDIDHELEHELDAIESHYELWFQELSRQKLEALEATRKKWTERKKLIVH* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1248 681 Pfam Protein kinase domain 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1248 681 Gene3D Transferase(Phosphotransferase) domain 1 120 300 - -
Ahy16g1248 681 Coils Coil 655 675 - -
Ahy16g1248 681 CDD STKc_WNK 35 294 - -
Ahy16g1248 681 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 433 IPR024678 GO:0004674|GO:0005524
Ahy16g1248 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Ahy16g1248 681 SUPERFAMILY Protein kinase-like (PK-like) 31 295 IPR011009 -
Ahy16g1248 681 PANTHER KINASE DOMAIN PROTEIN 5 681 - -
Ahy16g1248 681 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 681 - -
Ahy16g1248 681 SMART serkin_6 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1248 681 ProSiteProfiles Protein kinase domain profile. 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1248 681 Gene3D - 375 460 - -
Ahy16g1248 681 Gene3D Phosphorylase Kinase; domain 1 20 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1248 Ahy-Chr16 23187924 23191946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1248 24 436 MAP Kinase Kinase Kinase AT1G64630 61.538 4.73e-174 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ahy16g1248 Pkinase 1.90E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1248 K08867 - gmx:100809602 826.624