Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1227 ATGACGGAGTCACCGTCGGATAGGCGGTGTAAGCGCAACGCCGGCCCAAATTGCCGGTGCAGCGGGGTGGCGTCGCTGGGAAAATCGTTCTGCGAGAAACACTTGCAGCAGCGTGCGCTTCAAGACCAGAAACGCAGAATTAAGAGGAACGAAGGGAACGAATCGGAGCGCAGGTCCAACAAGACCAAGAGGAGGCTATCGACCGCCGATGACGTCAGTGCCGGATCCGAATTGGAAGTTTCCGTGTCCGAATTGATTGAAAACTCCGTCAGAAAGAAAAAAAAGAACGTGACGAAGAAGAAGAAACTGCTTGATCAAGAGAGTGTAAATGAGTGTGGTATTCACGAGGACTCTGACAGGGGAATTGAAGATAAGAAACAAATGGGTAGCAAAAGCAAGGAGGGTGGAAGTTTGATGTGTCATCAGTGCCAGAGGAATGATAAGAGTGGAGTTGTCTTTTGCTCAAAGTGCAACAGAAAACGCTACTGTTATGAATGCCTTGAGAGGTGGTACCCAGGTAAAACCCAGAAGGAAGTTGAGAATGCATGTCCATTCTGTTCAGGCAATTGCAATTGCAAAGCCTGCTTGCGGGAGGTTCCAGTGCTTATGGACCGAGAGGTAAATTCCAGTGTCAAATTACATCGACTGCGCTACTTACTCTATAAAGCCTTGCCTGTTCTGAGGCATATTCACAGGGAGCAAAGCTTAGAACTAGAGATTGAATCTAAAATAAGAGGTGAGCAACTGCAAGAAAAAGGCATAGCAAGAACAGAGCTAGACAAACGTGAGCGCTTATACTGTGACAATTGCAATACGTCTATAATTGGGTTTTACCGGAGCTGCCCCAATCCCAGTTGCTCTTATGATCTATGTCTCATGTGTTGTCAAGAGCTTAGGGAGGGTTGCCAACCTGGAGGCATAGAAGCTGAAACATCCCAGGAACAATTTTCTGAGAGAGCTCATAATCATGATTCATCAAGAACTAAGAGTAAAAAACAAAATAAAAGATATGGATGGGAGAGCCAGCTTGTGCCTACGAATTTTGATTTTCAAGCTGACATGTCCACCCCCTTCCCTGAATGGAACGCTAATACAGATGGTAACATTCCATGTCCACCAAAACAGCGTGGAGGATGTGGTACCACATTGCTAGAATTGAGACGTACTTTCAAATGTAACTGGGTAGTGAAATTGCTAAATAATGCTGAGGACCTCACCAGAGACTACACACCGCCTGATGTTGATATTACTGAAAAGTGCTCTTTATGTCAGAAAAATACTATTGAAGGAAAAACCAATCTTGAAGCCCGTAGGGCAGCATTCAGAGATGATGATAATGATAATTTCATATATAGCTCAAATGCCCGTGATATTTCTGATGATGAAATTGAGCATTTCCAGAGGCACTGGATGAGGGGAGAACCTGTTGTTGTGAGAAACATTCTAGATAAGACATCGGGTCTTAGCTGGGAGCCAATGGTTATGTGGAGGGCTTTAAGAGAAACAGGCTCCAAAGTGAGGTTTAAAGACGAAACTCGAAGTGTAGAAGCTATTGATTGCTTTGATTGGTGTGGGGTTGAGATCAATATTCACCAATTTTTCCAAGGCTACCTAGAAGGTCGAATGTATAAAAATGGGTGGCCAGAAATGCTGAAATTGAAAGATTGGCCCACATCCACCACTTTTGAAGAGCGCTTGCCTAGGCATGGCACGGAGTTCCTCATGGCACTCCCCTACAGGGATTACACTAATCCAAAATCTGGGACTTTGAATTTTGCCTCTAAACTTCCTGATGACTCACTAAAGCCGGATTTAGGACCCAAAACATATATTGCTTATGGATTTTCTGATGAGCTTGGTAGAGGAGATTCTGTGACAAAGCTGCACTGTGATGTGTCTGATGCAGTCAATGTGTTGATGCATACAACCAAAGTGAAGATAGATCCTTGTCGGAGAAAAATAATAAAAGAATTGCAGAAAAAATATGCCGAAGAAGACTCTCGTGAACTTTTATGTGAAGCTTTAGGAGATGCTGATGAAAGACCTAAATCTGAAGCATTGAGCCATGATCCGAAGGCAGACATTGGAATTGGTAATATTTCACCAACTAGCCACGTGGATCAGTGCATTCCATCTATATGTGAAGAAGGCAAGAGTCAGAAGTTAGAAACACATGATCTATCTGCAAGTAGCTTAGCTAATAATATGAGCAATAAGGAAGACAGAATGAGGATTGATTTTTTAGATGATAAGGAGCCTGCTGGTCCTGAGCTGAGAGAGTCAAAACAAGGCCTGGAGAAAGATACTTTGCAAACTGAAGATGGAGCTGAGGTTGCCCTCGGTGGTGCTGTTTGGGACATCTTCCGCCGGCAAGATGTCCCTAAGCTAATTGAGTACTTAAGAAAGCACAAGAATGAATTCCGTCATATAAAAAATCATCCTGTAGATTCTGTTATACATCCTATTCATGATCAAACTCTGTTTTTAAATGAGAGGCATAAGAAACAGCTGAAAAAGGAGTTCGATGTTGAACCATGGACCTTTGAGCAACACCTTGGGGAGGCTGTCTTCATTCCAGCAGGATGTCCTCACCAAGTGAGAAACAGACAATCTTGTATAAAGGTTGCTCTTGATTTCGTTTCTCCGGAAAATGTTGGAGAATGTTTACGACTAACTGAAGAGTTTCGTTTGCTCCCAAAACACCACAGAGCCAAGGAAGACAAATTGGAGGTTAAGAAGATGACGCTTTATGCTGTAAGTAATGCTGTTAGACAAGTCAAACAAATAATATCGGTCAACGAGTAA 2805 0.431 MTESPSDRRCKRNAGPNCRCSGVASLGKSFCEKHLQQRALQDQKRRIKRNEGNESERRSNKTKRRLSTADDVSAGSELEVSVSELIENSVRKKKKNVTKKKKLLDQESVNECGIHEDSDRGIEDKKQMGSKSKEGGSLMCHQCQRNDKSGVVFCSKCNRKRYCYECLERWYPGKTQKEVENACPFCSGNCNCKACLREVPVLMDREVNSSVKLHRLRYLLYKALPVLRHIHREQSLELEIESKIRGEQLQEKGIARTELDKRERLYCDNCNTSIIGFYRSCPNPSCSYDLCLMCCQELREGCQPGGIEAETSQEQFSERAHNHDSSRTKSKKQNKRYGWESQLVPTNFDFQADMSTPFPEWNANTDGNIPCPPKQRGGCGTTLLELRRTFKCNWVVKLLNNAEDLTRDYTPPDVDITEKCSLCQKNTIEGKTNLEARRAAFRDDDNDNFIYSSNARDISDDEIEHFQRHWMRGEPVVVRNILDKTSGLSWEPMVMWRALRETGSKVRFKDETRSVEAIDCFDWCGVEINIHQFFQGYLEGRMYKNGWPEMLKLKDWPTSTTFEERLPRHGTEFLMALPYRDYTNPKSGTLNFASKLPDDSLKPDLGPKTYIAYGFSDELGRGDSVTKLHCDVSDAVNVLMHTTKVKIDPCRRKIIKELQKKYAEEDSRELLCEALGDADERPKSEALSHDPKADIGIGNISPTSHVDQCIPSICEEGKSQKLETHDLSASSLANNMSNKEDRMRIDFLDDKEPAGPELRESKQGLEKDTLQTEDGAEVALGGAVWDIFRRQDVPKLIEYLRKHKNEFRHIKNHPVDSVIHPIHDQTLFLNERHKKQLKKEFDVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVGECLRLTEEFRLLPKHHRAKEDKLEVKKMTLYAVSNAVRQVKQIISVNE* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1227 934 ProSiteProfiles WRC domain profile. 4 52 IPR014977 -
Ahy16g1227 934 MobiDBLite consensus disorder prediction 38 70 - -
Ahy16g1227 934 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 18 735 - -
Ahy16g1227 934 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 735 IPR045109 GO:0032454|GO:0033169
Ahy16g1227 934 MobiDBLite consensus disorder prediction 681 700 - -
Ahy16g1227 934 SMART cupin_9 566 896 IPR003347 -
Ahy16g1227 934 ProSiteProfiles Zinc finger RING-type profile. 140 187 IPR001841 -
Ahy16g1227 934 ProSiteProfiles JmjC domain profile. 585 896 IPR003347 -
Ahy16g1227 934 SUPERFAMILY Clavaminate synthase-like 462 915 - -
Ahy16g1227 934 MobiDBLite consensus disorder prediction 313 336 - -
Ahy16g1227 934 MobiDBLite consensus disorder prediction 38 73 - -
Ahy16g1227 934 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 735 932 - -
Ahy16g1227 934 MobiDBLite consensus disorder prediction 314 336 - -
Ahy16g1227 934 Gene3D Cupin 451 905 - -
Ahy16g1227 934 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 735 932 IPR045109 GO:0032454|GO:0033169
Ahy16g1227 934 MobiDBLite consensus disorder prediction 750 769 - -
Ahy16g1227 934 Pfam JmjC domain, hydroxylase 780 879 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1227 Ahy-Chr16 22577718 22586409 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy16g1227 JmjC 1.30E-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1227 K15601 - mnt:21406261 1069.68