Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1219 ATGGCTGGTACACTTGTTGGTGGAGCTTTCCTCTCTGGCTTCATTAACGTCGTCTTTGACAGGTTCCTTACAACTGATGCTGTCAACTTGGTCTTGGGCAAGAAACTTGGCCCTGACTTGGTTCAAAGGCTGAAGACTGCTCTGTTGGGTGCTGAAGGTCTTGTTGCTGATGCTGAGATGAAGCAGTTTGGTAATTCATCTGTAAGGAAGTGGCTCGATAGTCTCCGGGATGCTGTTTACTGTGCTGAGGACTTGCTCGACACTGTCCTCGCCAAAGCCGCCACTCAAAAGGAGCTAAGTTCTTCCTGGTGGTCCCCTAGCTTCTTCATCAACCGAGATAGAGATGACATGGTAGACAAGATAGAAGGGGTGGTTACACGAATTGAGGATCTTGGAAAACAAAAAGATTTCCTTGGTCTTGAAAAGATTCCCACTGGTAGCTCATCATGGAGGACTCCATCCACTTCTCTTGTAAAAGGGAGTGTGTATGGCAGGGAGGATGACCAGAAGGCCTTAGTGCAGATGCTGAATGACAACAATGAGCATCACCTCTCTGTGATCGCTATTGTTGGCATAGGTGGGGTTGGTAAAACAACTTTAGCCCAATGGGTGTACAACAACAAGGAGTTTATGAAGGGATTTGATCTGAAAGCATGGGTTTGCGTTTCGGAGAAGTTTGAAGTTGTTGAGACTACAAGGAATGTCATAAAGCAGCTCCATGGAGGTTCTTGTAGTCTCGATGATTTCAATTCACTTCAACATACTTTGAAAGGAGAATTGTCCAATAAGAAGTTTTTCATTGTTCTTGATGATGTTTGGAGTGATGATGGTGACAAATGGAGTAATTTTATGACCCCTTTCCAACAAAATGGGAATAAGGGAAGTATTGCTCTTCTGACTACTCGGGAGGAAAATGTTGTTTCTGCAGTTCGAAATTGTCAGCCTTATTTTCTCAGGAAGTTGTCGGAGGACTATTGTTGGTCAGTGCTTGCAGAAAATGCATCTTTTCCACAGTCAAATGGGAGAGCAGCACTTGAAGAAATAGGAAGAAAGATTGTCAAAAAGTGTGATGGCTTGCCATTAGCTGCAGAAACACTTGGTCACTTGTTACGTACTAAGCATGATATTGAGGAATGGAACAAGATACTAATGAGTCATATTTGGGAATTTCCGGTGGAGAAGAGATTTTCAATTTGA 1197 0.4336 MAGTLVGGAFLSGFINVVFDRFLTTDAVNLVLGKKLGPDLVQRLKTALLGAEGLVADAEMKQFGNSSVRKWLDSLRDAVYCAEDLLDTVLAKAATQKELSSSWWSPSFFINRDRDDMVDKIEGVVTRIEDLGKQKDFLGLEKIPTGSSSWRTPSTSLVKGSVYGREDDQKALVQMLNDNNEHHLSVIAIVGIGGVGKTTLAQWVYNNKEFMKGFDLKAWVCVSEKFEVVETTRNVIKQLHGGSCSLDDFNSLQHTLKGELSNKKFFIVLDDVWSDDGDKWSNFMTPFQQNGNKGSIALLTTREENVVSAVRNCQPYFLRKLSEDYCWSVLAENASFPQSNGRAALEEIGRKIVKKCDGLPLAAETLGHLLRTKHDIEEWNKILMSHIWEFPVEKRFSI* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1219 398 Pfam NB-ARC domain 166 383 IPR002182 GO:0043531
Ahy16g1219 398 Gene3D - 154 314 IPR027417 -
Ahy16g1219 398 Pfam Rx N-terminal domain 39 98 IPR041118 -
Ahy16g1219 398 Gene3D - 21 134 - -
Ahy16g1219 398 PRINTS Disease resistance protein signature 259 273 - -
Ahy16g1219 398 PRINTS Disease resistance protein signature 356 370 - -
Ahy16g1219 398 PRINTS Disease resistance protein signature 186 201 - -
Ahy16g1219 398 PANTHER DISEASE RESISTANCE PROTEIN RP 40 381 IPR044974 GO:0006952
Ahy16g1219 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 391 IPR027417 -
Ahy16g1219 398 Gene3D - 320 389 IPR042197 -
Ahy16g1219 398 PANTHER OS05G0414200 PROTEIN 40 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1219 Ahy-Chr16 22392553 22394077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1219 184 373 WRKY Transcription Factor Family AT5G45050 27.551 3.54e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1219 - - aip:107645700 792.341