Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1206 ATGGAATATACTGAGAATGGGGAACATGGTCTCATCAATGAACTCATCCAAGGGAAGGAGCTAGCAAAGCAGCTATGCAATCTCCTCTCTTCTTCTTCTTCTTCATCATCCAAAGAAATCTTAATTGACAAGATACTTTCCACCTATGAGAAAGCCCTCACCATGCTCAACTCTGACTCCACCATTACCAATCTCATTAATTCCCATTCTTCTTCTTCTTCTATAAATGGGAGCCCTTCAAGGAGTGACCTCATTGATAATGATGAAGAATTCAAGGACAAACCCCCCCTCAAGAAGAGGAAGACTATGCCCAAATGGACAGAGAAAGTGAAAGTATGTTCAAAAACAGGACTTGAGGGATCTTTGGATGATGGGTATAGCTGGAGAAAATATGGACAAAAGGATATTCTTCGAGCCAAGTTCCCAAGAGGATATTACAGATGCACATACAGAAATGTACAAGGGTGCCTTGCAACAAAACAAGTTCAAAGATCAGATGTAGACCCAACAATGATTGAGGTGAACTACAGAGGAAGACACACGTGCACCCAATCTAAGCATTCCAACAAAGCGTTTCCATCAAAAACAATGTTGCCAGTGTTGGAGAAGAACCAATTCCACAAGTTCCAAAACAACCAACCTCAAAAGCAGGAGAAAATGGAACAAACCCAAGAGGAAATTTTCAACTTTGAACCAAAGCTTGAGTTGGACACTAACACCAACATCACAACCAAGGATGATGATATCTTCCCATGGTTCTGCTACCTTTCTCCTTCAATGGGATCCGAAAACGGTGATAACGACATGTTGTTATCTGATTCCATGTTCTTGGAAAGCTTTTCCTCTGATATAGCATCATTCATATCACCATCAACTTCAGAATCAGACCTTTTCTGTTTATCACCATGCCAATTTGGAAGCAGCAATAATAATGGAATAGTCCAATCCTCAGAATCTGATATAACTGAGATACTTTCAACTCCAACCTCAGTAACCAATTCCCCAATCATGGATTTCGATATGCTGCTTGATAAAGTGGATTTCGACACCATATTCCCTTCCAACACAACGGAATATTCTTCTTCATGA 1089 0.4031 MEYTENGEHGLINELIQGKELAKQLCNLLSSSSSSSSKEILIDKILSTYEKALTMLNSDSTITNLINSHSSSSSINGSPSRSDLIDNDEEFKDKPPLKKRKTMPKWTEKVKVCSKTGLEGSLDDGYSWRKYGQKDILRAKFPRGYYRCTYRNVQGCLATKQVQRSDVDPTMIEVNYRGRHTCTQSKHSNKAFPSKTMLPVLEKNQFHKFQNNQPQKQEKMEQTQEEIFNFEPKLELDTNTNITTKDDDIFPWFCYLSPSMGSENGDNDMLLSDSMFLESFSSDIASFISPSTSESDLFCLSPCQFGSSNNNGIVQSSESDITEILSTPTSVTNSPIMDFDMLLDKVDFDTIFPSNTTEYSSS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1206 362 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g1206 362 Pfam WRKY DNA -binding domain 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g1206 362 MobiDBLite consensus disorder prediction 68 99 - -
Ahy16g1206 362 SUPERFAMILY WRKY DNA-binding domain 121 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g1206 362 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g1206 362 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 4 352 - -
Ahy16g1206 362 MobiDBLite consensus disorder prediction 83 99 - -
Ahy16g1206 362 Gene3D WRKY domain 108 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g1206 362 MobiDBLite consensus disorder prediction 68 82 - -
Ahy16g1206 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 352 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1206 Ahy-Chr16 22075241 22076944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1206 12 288 WRKY Transcription Factor Family AT5G24110 37.063 3.66e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy16g1206 WRKY 3.20E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1206 - - gmx:100790050 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1206 16 22075241 22076944 Ahy6g0210 6 2659828 2661516 hybridization
Ahy16g1206 16 22075241 22076944 Ahy12g0311 12 4442333 4445531 PCT
Ahy12g0311 12 4442333 4445531 Ahy16g1206 16 22075241 22076944 PCT