Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1175 ATGAATTGCTTTCCGTGCTTCACTTCTCAAAAAAGCAAGAAAAGCAGTAGCAGCAAGGATTTTTCTCCTCCTCCACAGGAACAGGAACAAGTTGTAGCAAGACCACCAGATATAAAGAAACCAAAGGCAGAAGACATAAACCAAGTAGACACATCGAATATTAAAGCACACAATTTCACATTCCGTGAGCTAGCAACTGCAACAAAGAATTTCCGGCAAGAAATGTTGATGGGTGAAGGTGGCTTTGGCAGAGTCTACAAGGGCACAATCCCTGCAACCGGCCAGGTTGTAGCAGTTAAGCAACTGGACCGAAATGGAATGCAAGGAGGAAGCAAGGAATTTCTGGTTGAGGTTTTGACTCTAAGCCTCATGAGCCATGAGAATCTCGTCAAACTCACTGGTTATTGTGCCGATGGTGATCAACGTCTTTTGGTGTATGAATTCATGCCTGCTGGCTCTCTAGAAAAGCGGCTTCTCGAGCGGGGACCGGAGCAACCTCCATTAGATTGGTACGTCAGAATGAAGATAGCATCTGATGCGGCAAAAGGACTATGGTACTTGCACGACATGGCGAATCCCCCTGTCATATTCAGGGACTTGAAATCCTCCAACATCTTGCTGGACAATGATAACAATGCAAAGCTATCCGATTACGGACTTGCAAAACTTGCTGGTAAAGATAAGATGAATATTGTTCCTACCAGAGTTATGGGCACCTATGGTTATAGTGCCCCTGAATACGTAAGAACAGGTCAACTCACCTTGAAGTCAGATGTCTATAGTTTCGGTGTTGTCTTGCTAGAGCTCATAACTGGACGCCGCGCAGTTGACACCACTAGACCCAACGACGAGCAAAATTTAGTTTCATGGGCGCAACCCATATTTAGAGACCCGAAAAAGTATCCAGAAATGGCAGATCCACTTCTGAAAGGCAAGTTTCCAGAGAAGGATCTGAATCAAGTTGTTGCAATAGCAGCCATGTGCCTACAGGAGGAATCAGCAGCGCGTCCTCTCATGAGTGATGTGGTGACTGCCCTCAGTTTTCTCTCAACAACTCCGCCTCCGGAGGCCAATCCTCAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCCGAGCCCGAGACCGAGCCTGAGCCTGAGCCTGTCCCTGCCCCTGCCCCTCTTTCTGCTGCGCGCTCGGCCAAGAGTGAAGCATCCGCAAGTGTGAGTGGCAGCGGTAGTGATAGCGGAAGTGATAGTGGAAGCTACAGCCAGAGCCAGAGCGATTATGATGGATCTGATGGTGAATCAGACTACTATGAAGAGGATGAAGATAAACGAAGCTACAGCCCACAAGATAGTATACAATCTAGGGAATTCTACTCCAAGTCAAGCCGCAAAAGCAGCACCAGATCATCGTCCAGGGCTCACAGCGATGTAACTTCGAATTCCGAAGATGAAAGGAGAGGACCATCCCCACGCAAAGCCAGTAGGAAACATTTAAGCCAGAAGATTAGCAAGAAGTCTTCCAGCAAGGAAAAAGAGTTAGGCCAGAATAGCAGTAAGAAAGCTGCTTCTCGGAAGAACAGAGAATTAAAGCAGAAGAGTAGCAGAAACAAAGATAGAGAATTGAGCCAAAAGAGCAGTAAGAAAAAACCATCATCTTCTTCAAAGAGGAGAACCGGGGTGGGACCAGAGGAGTCAAAGTCAAGGGATGAAGGTGAAGCCATGCTTAGTGAGAGATCATCACGAGAGGATATATCTTACGGTCACGACAACCAAGAGAGTAGTGAGAGCATCCCATTCGAGTATGAAAGCAGCAAGGAACCATCAGCTATCCCGCCATTGCCACCAACAGCAAGCACTCTCACATAA 1854 0.4746 MNCFPCFTSQKSKKSSSSKDFSPPPQEQEQVVARPPDIKKPKAEDINQVDTSNIKAHNFTFRELATATKNFRQEMLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGMQGGSKEFLVEVLTLSLMSHENLVKLTGYCADGDQRLLVYEFMPAGSLEKRLLERGPEQPPLDWYVRMKIASDAAKGLWYLHDMANPPVIFRDLKSSNILLDNDNNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGQLTLKSDVYSFGVVLLELITGRRAVDTTRPNDEQNLVSWAQPIFRDPKKYPEMADPLLKGKFPEKDLNQVVAIAAMCLQEESAARPLMSDVVTALSFLSTTPPPEANPQPEPEPEPEPEPEPETEPEPEPVPAPAPLSAARSAKSEASASVSGSGSDSGSDSGSYSQSQSDYDGSDGESDYYEEDEDKRSYSPQDSIQSREFYSKSSRKSSTRSSSRAHSDVTSNSEDERRGPSPRKASRKHLSQKISKKSSSKEKELGQNSSKKAASRKNRELKQKSSRNKDRELSQKSSKKKPSSSSKRRTGVGPEESKSRDEGEAMLSERSSREDISYGHDNQESSESIPFEYESSKEPSAIPPLPPTASTLT* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1175 617 MobiDBLite consensus disorder prediction 446 472 - -
Ahy16g1175 617 MobiDBLite consensus disorder prediction 1 25 - -
Ahy16g1175 617 Pfam Protein kinase domain 72 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1175 617 MobiDBLite consensus disorder prediction 363 377 - -
Ahy16g1175 617 SUPERFAMILY Protein kinase-like (PK-like) 57 374 IPR011009 -
Ahy16g1175 617 MobiDBLite consensus disorder prediction 349 617 - -
Ahy16g1175 617 SMART serkin_6 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1175 617 ProSiteProfiles Protein kinase domain profile. 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1175 617 MobiDBLite consensus disorder prediction 394 426 - -
Ahy16g1175 617 CDD STKc_IRAK 77 346 - -
Ahy16g1175 617 MobiDBLite consensus disorder prediction 555 585 - -
Ahy16g1175 617 Gene3D Transferase(Phosphotransferase) domain 1 149 355 - -
Ahy16g1175 617 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 560 - -
Ahy16g1175 617 PANTHER OS07G0668900 PROTEIN 1 560 - -
Ahy16g1175 617 MobiDBLite consensus disorder prediction 499 542 - -
Ahy16g1175 617 MobiDBLite consensus disorder prediction 1 44 - -
Ahy16g1175 617 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1175 Ahy-Chr16 21416218 21418857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1175 1 378 Glycoside Hydrolase AT3G07070 61.340 9.97e-165 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Ahy16g1175 Pkinase 1.30E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1175 - - ahf:112759084 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1175 16 21416218 21418857 Ahy6g0240 6 2943619 2945519 hybridization