Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1166 ATGTCTACATACGGGGATGATGTTAAGAATGATTCTGATAATGATTTGGGTGATGATTTTATTTATGAACCGAATTCACATGATGATGTTGAAGATGATGATGTTGATTCGTTAGATTTTACTAACAAGAGTGAACATGATTGTGATGTTAAAAGAATATCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAAGCTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGCTTTGTAATGAGAAAGGATGACATCGTTAGTGATAGGGAAAGTAAAATCATTTGTAGGCAACTTGTTTGCAATAAAGAGGACTGCAGGAATATGAGATATCTTGATCTGGAGAATAGATCATGGGAGGCAAGGTCAATCACACGAATTAAGTGCCCAGCACGGCTTAAGGTTAAGGTTGACTACGGTTGTGTGGAGAATCTTCATAATTTTGGTGTCAAGATGTGCCATATTATGGGATATATTGCATTTCAGAAGGATGGATATCGTCATGCTGGCTTCACGCGCAAAGATTTATACAATCACATTGATCGTTATCGTAGATCAAAAGTAAAAAACGGGGATGCAAATGTCGCAATTAACTATTTGATTGGCAAGTCAAACAACAATCCGTTTTTCTTTGGGAAGTATACGTTCACTAGTGACCAAAGGCTCAAGCATATATTTTGGGCAGATGGGCAATTAATTGTCGACTATCACTGCTTTGGAAATATTGCTGCTTTTGATTCAACATACAAAAGGAATAAATACAACAAACCTTTGGTCATATTTTCCGGATGCAATCATCATGGGCAAACTATTATTTTCGGCTCCGGTTTACTATCAGACGAAATGACATACACATCTAAGTGGTTGTTGGAAATGTTTGTTGAAGCGATGGATGGGAAGCTTCCTAAAGCAGTTATAACAGTTGGAGACCTTGTCATGTGA 960 0.375 MSTYGDDVKNDSDNDLGDDFIYEPNSHDDVEDDDVDSLDFTNKSEHDCDVKRISDLMVEDIWNLEFRTEDEACQFYNAYACWHGFVMRKDDIVSDRESKIICRQLVCNKEDCRNMRYLDLENRSWEARSITRIKCPARLKVKVDYGCVENLHNFGVKMCHIMGYIAFQKDGYRHAGFTRKDLYNHIDRYRRSKVKNGDANVAINYLIGKSNNNPFFFGKYTFTSDQRLKHIFWADGQLIVDYHCFGNIAAFDSTYKRNKYNKPLVIFSGCNHHGQTIIFGSGLLSDEMTYTSKWLLEMFVEAMDGKLPKAVITVGDLVM* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1166 319 Pfam MULE transposase domain 250 313 IPR018289 -
Ahy16g1166 319 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 144 IPR031052 GO:0006355
Ahy16g1166 319 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 151 319 IPR031052 GO:0006355
Ahy16g1166 319 MobiDBLite consensus disorder prediction 8 24 - -
Ahy16g1166 319 Pfam FAR1 DNA-binding domain 74 144 IPR004330 -
Ahy16g1166 319 MobiDBLite consensus disorder prediction 1 34 - -
Ahy16g1166 319 PANTHER OS02G0262500 PROTEIN 60 144 - -
Ahy16g1166 319 PANTHER OS02G0262500 PROTEIN 151 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1166 Ahy-Chr16 21160256 21161325 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g1166 FAR1 2.40E-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1166 - - aip:107646409 672.159