Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1143 ATGGAACCTAATGACAACCAACTCAGCTCCTACTTCCACCAACAACAACAACAGCACCACCACCAGCAACAGCATCACCACCAGCAGCACCACCAGAGCGCCGCCGCGCCCTCCGGCGTGGGAGCCACGACGGCGGTTTCGCCGACCAACGGCCTTTTAGGGAACACCGATGGGGCCCACTCGCACATGTTGTACCCTCACACGGTGCCGTCGGCGGTGTCGTCGCAGCTGGTGGAGCCACCGGCGAAGAGGAAGAGAGGTCGGCCTCGCAAGTACGGTACTCCCGAGCAAGCCCTCGCTGCGAAGAAAGCCTCTACGACGTCATCTTCCGCCGCTCACTCCTTCTCCCCAACCTCCTCTTCCTCCGCCGCAAAGAAATCCCTTCCTCACCAGCCTCGTGCCTTGGGTGGTTCCTCGTTTCCTTCCTCCTCTTCCAAGAAATCGCACTCCTTTGGTTTAGGCAATGCAGGACAAGGCTTCACTCCGCATGTCATTGCTGTAGCTGCTGGTGAGGATGTTGGCCAAAAAATTATGTTATTTATGCAACAAAGTAAGCGTGAGATGTGCATTTTGTCTGCATCTGGTTCCATATCCAATGCCTCTCTTCGTCAGCCAGCAACCTCAGGAGGCAACGTTACATATGAGGTTATTGTCGGTACATTTTTTGTTGACTCCAAGAAGGATAGTGGTCCTGGTGCAAAAGGTGATGCCTCTGCTAGTAAGTTGCCGTCACCAGTTGGTGACTCGGTATCAAGCTTAGGTTACCGCCCAGTTGACTCTACTAGTGGAAATCCAATCCGGGGAAATGAAGAGCATCAAACTATGGGGGGAAGTCATTACATGATTCAACAGCTTGGTTTGCACATGACGCCTCCCCGGTCAACAGACTGGGGAAGCCATCCGGAATCAAGAAATTCCGGCTATGAGATGACAGGAAGAACAGGTCCGGGGGCCCACCAATCTCCAGAGAACGGGGGCTATGACCAGATCACTGATTGA 999 0.5395 MEPNDNQLSSYFHQQQQQHHHQQQHHHQQHHQSAAAPSGVGATTAVSPTNGLLGNTDGAHSHMLYPHTVPSAVSSQLVEPPAKRKRGRPRKYGTPEQALAAKKASTTSSSAAHSFSPTSSSSAAKKSLPHQPRALGGSSFPSSSSKKSHSFGLGNAGQGFTPHVIAVAAGEDVGQKIMLFMQQSKREMCILSASGSISNASLRQPATSGGNVTYEVIVGTFFVDSKKDSGPGAKGDASASKLPSPVGDSVSSLGYRPVDSTSGNPIRGNEEHQTMGGSHYMIQQLGLHMTPPRSTDWGSHPESRNSGYEMTGRTGPGAHQSPENGGYDQITD* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1143 332 ProSiteProfiles PPC domain profile profile. 156 293 IPR005175 -
Ahy16g1143 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 215 - -
Ahy16g1143 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 215 324 - -
Ahy16g1143 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 215 IPR039605 GO:0003680
Ahy16g1143 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 215 324 IPR039605 GO:0003680
Ahy16g1143 332 Gene3D - 162 225 - -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 225 273 - -
Ahy16g1143 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 208 IPR005175 -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 254 273 - -
Ahy16g1143 332 CDD DUF296 161 230 IPR005175 -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 29 56 - -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 1 18 - -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 296 310 - -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 100 127 - -
Ahy16g1143 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 158 225 - -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 1 154 - -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 290 332 - -
Ahy16g1143 332 MobiDBLite consensus disorder prediction 136 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1143 Ahy-Chr16 20697449 20702950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1143 57 329 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 40.517 7.72e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1143 - - adu:107491998 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1143 16 20697449 20702950 Ahy16g1143 16 20697449 20702950 ECH
Ahy16g1143 16 20697449 20702950 Ahy6g0264 6 3280325 3285565 hybridization