Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1136 ATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTCCGTAATTATACGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCGGGCGAGAATTCGTGCAAGACTAGATACAAAAATTCAGAAATGGAAGGTTGTTTCGTTATACGAAGAGCACTCTCATGAATTAGTTGATCCACTCGACGTTAGCATGATGCCTGAGTTTCGCACATTCAGTGTATCGGATAAAGATCAGGGAAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGGAAAAGGTGAAGGGTGGTGATGCAAATGCTGCAATAAGCTACCTGAGAGGTAAAGTTGGGAATGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTCTGGGCTAATGGGACTAGCCGTATTGATTATGAGTGCTTTGGGGATGTCTTGACATTTGATTCGACTTACAATAGGAATATCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATCATGGGCAGACTGTCATATTTGGTTGTGGTCTTCTTGTTAATGAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTTTTTTGGAAGCAATGGGGAGTAAACACCCTACGGCAGTTGTCACCGACGGAGATCTTTCAATGAGAGAAGCAATTAAACAGGTCTTTCCTTATGCAACACATCGACTATGTGCATGGCACTTACATAGGAATGCATGCGAGAAGGTTAAGAACAGTGGATTTCTAAATGACTTCAAGAAATTGATTTATGCCAATGTGAGTGTTGTAGAGTTTCAGGTCATGTGGGAAGACATGGTGGCCAGGACAACATCCCAGTGTGAAGGGATTAACTCTCTAATAAAAGCATATGTGAGAAAGAAAGATACCCTTGAATTCATCAATAACATGGAGACCGTGGTTAGCCATTACAGGAACAATGAAAGAGTCGCAGAGTTCAATAGTAAATATACCGATCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCGTAACATGTTCCGGGAGGTCAGAAAGGAAATTGAGGGTGCTTGTGCAATGAATACAGAGTTGGTAATTCACGATAGTGGAAAACTATACTTCAAGTGTAACATTTTTGGAGTGCCAGAGATTGATCATGTGGTTGAGTTTGACAGAGTTAGGGAGATGCTTCGTTGCGAGTGTCTGTGGTTCGAAAATAGAGGGATTCCCTGCATGCACATATTTGTCTGCCTAAAGCACCAACACGTTGAAGTTATTCCAGAATGCTTAGTGTGTAAGCGTTGGACGAAGATTGCCAAGAGTGACTTTATGAAGACAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATGTTGCATGTAAGAACTCAAGTGATTTTGTCGAAGCAATGAATGTTGTTGTCAACACAATTAGAAAACTTCAAAAGCGAGGTGAAAATTCACGCAACGGTAACTTAGACGATGACTACATTGTTGACCCATTGGTGGTGAAGAGTAAGGGAGCCCTCAAGAAAAACTCAAAATTTAAGCAACAGAGAAGGTGCTCAAACTGCGGTGTGACAGGGCACTACAACAAAAGTTGTCCTAATCTTCCTGGTAGAATTCCAAAGGAGCCAGTAGACGATGATACAGAAAAGAATATCAGCAGCCATCTTGACATCTTCACTAAGCGCAAAAGACATGATAGTCTGAAAAATCAGCAGAAGATGGAAAAAGATAGGAACATTGGTGGTGGAATAGCACCAACCTACGGAAGGTGA 2016 0.4172 MMHGFAVRLDEVRRDSDGSVIIRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCRARIRARLDTKIQKWKVVSLYEEHSHELVDPLDVSMMPEFRTFSVSDKDQGKNLHDIGIRTCHILGYLAAQKGGYANLSFNQKDMYNLITQHRKEKVKGGDANAAISYLRGKVGNDSYFFGKYTLSNENRLENLFWANGTSRIDYECFGDVLTFDSTYNRNIYNKPLVIFSGSNHHGQTVIFGCGLLVNEDIGSYKWLLETFLEAMGSKHPTAVVTDGDLSMREAIKQVFPYATHRLCAWHLHRNACEKVKNSGFLNDFKKLIYANVSVVEFQVMWEDMVARTTSQCEGINSLIKAYVRKKDTLEFINNMETVVSHYRNNERVAEFNSKYTDPVLVTSLPTLEDFAAKTFTRNMFREVRKEIEGACAMNTELVIHDSGKLYFKCNIFGVPEIDHVVEFDRVREMLRCECLWFENRGIPCMHIFVCLKHQHVEVIPECLVCKRWTKIAKSDFMKTNVDDPSDSDKVLKCRLGVLGAECSRLMDVACKNSSDFVEAMNVVVNTIRKLQKRGENSRNGNLDDDYIVDPLVVKSKGALKKNSKFKQQRRCSNCGVTGHYNKSCPNLPGRIPKEPVDDDTEKNISSHLDIFTKRKRHDSLKNQQKMEKDRNIGGGIAPTYGR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1136 671 ProSiteProfiles Zinc finger SWIM-type profile. 446 484 IPR007527 GO:0008270
Ahy16g1136 671 SUPERFAMILY Retrovirus zinc finger-like domains 590 621 IPR036875 GO:0003676|GO:0008270
Ahy16g1136 671 MobiDBLite consensus disorder prediction 643 671 - -
Ahy16g1136 671 PANTHER OS02G0262500 PROTEIN 3 337 - -
Ahy16g1136 671 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 337 IPR031052 GO:0006355
Ahy16g1136 671 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 340 584 IPR031052 GO:0006355
Ahy16g1136 671 MobiDBLite consensus disorder prediction 643 657 - -
Ahy16g1136 671 ProSiteProfiles Zinc finger CCHC-type profile. 598 615 IPR001878 GO:0003676|GO:0008270
Ahy16g1136 671 PANTHER OS02G0262500 PROTEIN 340 584 - -
Ahy16g1136 671 Pfam MULE transposase domain 205 299 IPR018289 -
Ahy16g1136 671 Pfam FAR1 DNA-binding domain 3 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1136 Ahy-Chr16 20574712 20576952 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g1136 MULE 1.50E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1136 - - aip:107641230 1251.88