Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1134 ATGGCTCCTCCACCACCCAATGGTTATCGTCACGAAACGATGATTGACATAAAGAACAGCAACAAGACCGCTCAACAAACAGTGGGTTCCAGCGGCGGTCTGGAGTTCTGGAACCTCACCTACACCGTGAGCAAGAAGTTGAAGGTGGAGGAGAAGTGGTCGAATGAAGACGTGGACTTACTCCACGATATCAGTGGCTATGCACCGAAGGGGTGCATCACGGCGGTGATGGGGCCCAGTGGTGCGGGAAAGTCAACGTTCTTGGACGGACTTGCTGGGAGGATCAAGAGTGGGAGCCTGAAAGGAAGGATTTCATTGGATGGTGCAAGTGTGAGTGCAAGCTTGATCAAGAGAACTTGTGCATATATCATGCAGGACGATAGGCTTTTTCCTATGCTCACTGTTTATGAGACTTTGATGTTTGCTGCTGATTTTCGATTGGGGCCTCTCTCGCTTGCTGATAAAAGGCACAGAGTCGATAACTTGATAGATCAACTTGGCTTATCGACATCCAGGAACACGTACATAGGAGACGAAGGAACAAGAGGAGTTTCGGGTGGAGAGCGGCGGAGAGTGTCAATAGGAGTGAACATCATCCACGGTCCGTCCCTTCTCTTCCTAGACGAGCCAACCTCCGGGCTGGACTCCACAAGCGCACACAATGTGATCGAAAAGGTTCACGACATTGCACGCAGCGGCAGCACCGTCATCCTCACCATCCACCAACCCTCTTCAAGAATCCAAATGCTCCTCGACCATCTCATCATTCTCGCCAGGGGCCAGCTCATGTACCAAGGCTCACCTAATGACGTGACGCAACATTTGACTCGCATGTCCCGCAGGGTACCAAAGGGTGAGAACCCTATCGAACATCTCATTGACGTGATCCAAGAATACGATCAATGTGAGGTTGGAGTGGAGGCGCTTGCTGAGTTTGCACGCACTGGAATGAAGCCCCCTCTGTTGAAGGAGGGTGTGTCTGTCGAGCCGTCGCCGTCGCTCGTGAGGGCACGGCATGGGCGTGGGTATGAGGAGAAGTCGTTGGAGGTATCTGGGACATCTCAAGTGAGTAGGAGAGTTGCGGATGAGTATGGTCACAGTTTGAGGAGTCCGTACAACAAGAATTCGCAGTCGTGGAGCAGTAGTCACAGCGCTATGTTTCTCAAGTTCACTCCTTCACGACTCAGGAATAAAGAGTCCAAGCCACACAATAATCCTGCAAGGCATGGTTCCTCACCAGGGTACTACACATACTCAAGTGAGATCCTGGCAGCGACACCAACCCCTCACAGCAGTGACTACACTGTGAACGAAAACGACTATCTCACCCCAACAACCGGCGCTGCCACGCCAGAGCACCTGGCTCCAAAATTCGCCAACTCCTTCCTCTCGGAAACCTGGATCCTGATGCGGCGCAACTTCATCAACATCCGAAGAACCCCAGAGCTGTTCCTGTCACGCCTCATGGTACTCACCATCATGGGCTTCATGATGGCCACAATGTTCCACAACCCCAAACAGAATCTTCAGGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCCTCAAACGACGCCGTCCCTGCCTTCATCCAAGAACGCTTCATCTTCATTAGAGAAACCTCTCACAATGCCTACAGAGCCTCTTCCTACACCATCGCCGGCTTAATCACTCACATGCCTTTTCTTCTCCTCCAAGCTTCCGTTTACGCTGCCATTGTTTGGTTTGCCCTAACCCTAAGAGGTCCTTTCTACTACTTCCTCATCGTCCTCTTCGTCTCGCTTCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCGTTGTTCCCAACTATATACTAGGTTACGCCGCTGTCATTGCTTTCACTGCCTTGTTCTTCTTGTTTTGTGGATACTTCTTGAGCAGCCATGATATACCGGTTTATTGGCGGTGGATGAACAAAATTTCCACCATGACTTACCCTTATGAAGGGCTACTAATGAACCAGTATCAGACAAACATTACTTTTGGACACAACAATAGCATCAACATAACTGGTTTTGGAATCTTGAATAATCTTCACATTGGGACTGAGGAGTATAAGAAGTGGGAGAATGTGGGAATCATGTTAGGTTGGGCTGTGTTATATAGGCTTTTGTTTTACTTGGTGCTACGATTTGGATCTAAGAACCAGAGGTCCTAG 2205 0.4998 MAPPPPNGYRHETMIDIKNSNKTAQQTVGSSGGLEFWNLTYTVSKKLKVEEKWSNEDVDLLHDISGYAPKGCITAVMGPSGAGKSTFLDGLAGRIKSGSLKGRISLDGASVSASLIKRTCAYIMQDDRLFPMLTVYETLMFAADFRLGPLSLADKRHRVDNLIDQLGLSTSRNTYIGDEGTRGVSGGERRRVSIGVNIIHGPSLLFLDEPTSGLDSTSAHNVIEKVHDIARSGSTVILTIHQPSSRIQMLLDHLIILARGQLMYQGSPNDVTQHLTRMSRRVPKGENPIEHLIDVIQEYDQCEVGVEALAEFARTGMKPPLLKEGVSVEPSPSLVRARHGRGYEEKSLEVSGTSQVSRRVADEYGHSLRSPYNKNSQSWSSSHSAMFLKFTPSRLRNKESKPHNNPARHGSSPGYYTYSSEILAATPTPHSSDYTVNENDYLTPTTGAATPEHLAPKFANSFLSETWILMRRNFINIRRTPELFLSRLMVLTIMGFMMATMFHNPKQNLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGLITHMPFLLLQASVYAAIVWFALTLRGPFYYFLIVLFVSLLSTNSFVVFISSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPVYWRWMNKISTMTYPYEGLLMNQYQTNITFGHNNSINITGFGILNNLHIGTEEYKKWENVGIMLGWAVLYRLLFYLVLRFGSKNQRS* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1134 734 SMART AAA_5 70 269 IPR003593 -
Ahy16g1134 734 Pfam ABC transporter 61 212 IPR003439 GO:0005524
Ahy16g1134 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 278 IPR027417 -
Ahy16g1134 734 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 284 IPR003439 GO:0005524
Ahy16g1134 734 Pfam ABC-2 type transporter 241 298 IPR043926 GO:0140359
Ahy16g1134 734 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
Ahy16g1134 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 10 728 - -
Ahy16g1134 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 10 728 - -
Ahy16g1134 734 MobiDBLite consensus disorder prediction 332 354 - -
Ahy16g1134 734 Gene3D - 42 313 IPR027417 -
Ahy16g1134 734 CDD ABCG_EPDR 34 266 - -
Ahy16g1134 734 Pfam ABC-2 type transporter 466 671 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1134 Ahy-Chr16 20565624 20568107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1134 54 357 Calmodulin-binding Proteins AT2G36910 24.675 4.90e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1134 K05681 - gmx:100804809 1073.54