Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1119 ATGGAAAAGAGAAGCAACGACGGCGAGACACGGTGTGGAGAAGAGAAGCAGAAACGACGCCGGCGAGGAACGGAGAAGCGGCGACCCACGACGAGGAGCGGAGAAGCGGCGACACGACCACGAAGAGGAGCAGCGACAGAGAGAGAGAAGGGAGAGAAGGATTCGACGATGACAACGATGCGGGGCTGTGGGGGCTGCAGTGGCTACGGGCTGGGCGGCTGTGGGTGGCTACGAAACAGAACAAATGCTAAAGGAATATCTAATAATGTGTACTTACTAGGTTTGTTAAGGTGTGGCAAGAGTTGTAGGCTTCGTTGGATAAATTACCTGAGGCCAGATATTAAAAGAGGGAAATTCAGCAAGGAAGAGGAAGAGGCTATTCTCAAACTACATGCAGTTCTTGGAAATAGGTGGTCTGCGATTGCAGCAAGATTACCGGGTCGTACAGATAATGAAATAAAGAACTTTTGGCACACTCATTTGAAGAAAAGGATTGAGAAAAGTGAAGTGCACAATAATGGCATCAATAGTAGTAAATATTCCTCGTGTTCCTCACAAATCATCACCATGCCAAGAGTAGTACCAGCAATTGCACCAAGTAGTGGTAGTGGTAGTGCTGCTTCTAGCTTCAATGATGGTTTATCCTCAACCTCAAGGAATAGATCAAGTTCATCACCAAATATTATTGCAGGACCAGGATTTTGCAGTGCAATAACATCCTCTTCTGATGATACTTCAGGTGAAACCATGGGAAATCATAACGATGGTTCCATTCAGCTCAGTGAAGAGATGGAATTTTGGTACAATATATTCATCAAATCAGGACAACTATCTTAA 837 0.4528 MEKRSNDGETRCGEEKQKRRRRGTEKRRPTTRSGEAATRPRRGAATEREKGEKDSTMTTMRGCGGCSGYGLGGCGWLRNRTNAKGISNNVYLLGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEEAILKLHAVLGNRWSAIAARLPGRTDNEIKNFWHTHLKKRIEKSEVHNNGINSSKYSSCSSQIITMPRVVPAIAPSSGSGSAASSFNDGLSSTSRNRSSSSPNIIAGPGFCSAITSSSDDTSGETMGNHNDGSIQLSEEMEFWYNIFIKSGQLS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1119 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 165 IPR017930 -
Ahy16g1119 278 MobiDBLite consensus disorder prediction 1 57 - -
Ahy16g1119 278 MobiDBLite consensus disorder prediction 1 20 - -
Ahy16g1119 278 SUPERFAMILY Homeodomain-like 97 169 IPR009057 -
Ahy16g1119 278 MobiDBLite consensus disorder prediction 208 228 - -
Ahy16g1119 278 MobiDBLite consensus disorder prediction 28 56 - -
Ahy16g1119 278 Pfam Myb-like DNA-binding domain 116 161 IPR001005 -
Ahy16g1119 278 SMART sant 115 163 IPR001005 -
Ahy16g1119 278 Gene3D - 78 115 - -
Ahy16g1119 278 CDD SANT 118 161 IPR001005 -
Ahy16g1119 278 Gene3D - 117 186 - -
Ahy16g1119 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 94 276 - -
Ahy16g1119 278 ProSiteProfiles Myb-like domain profile. 111 161 IPR001005 -
Ahy16g1119 278 PANTHER MYB TRANSCRIPTION FACTOR 94 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1119 Ahy-Chr16 20298063 20300457 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1119 92 269 MYB Transcription Factor Family AT1G06180 46.073 1.02e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy16g1119 Myb_DNA-binding 1.80E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1119 K09422 - gmx:102663040 197.208