Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1107 ATGTCTTCATCTTCTCCTGTTCTTCCAACACCACTGGATAACAAGTACATGAAACCCCCAGATTCGTTTCAGCTTTCGCCTATAAGAGAAATGACTGTGAATCCATCCCCCTTACAATCTACATCGTCGAATTCCAACACCAGAAGTACCGGACACACATTTTCGTCCCCTGGTGTTGTCTCTTTTTCTTCAGCTTCGCAGCATGAAAGGCAGCATCAACCTTCTTCCTTTGTTTCACAGACATTAGGTGAAGACAGTGTGTCTTCGGAGCTACATTCAGCATCATTCATTTCCCAGCCTCAAGAAAGCGACGAGATTTCCTGGGGACCGGATCCGTTCCAGGATATGCTTGGTTTCCCTGAAAATGTTTCTGTCCAGCATGATCAGGTGGAAAATGGTGCTTGTTATACAAACGATGACAATGTCAAACAATCTGATTTTGGGGAGTGGGTTGATAAGTTAATGTCAATTGATGATTCTTATGACCCAAATTGGAGTCAGCTCCTTGGTGATGATAATGAATCAGAACCAAAACCAAAGCCCATCCAGCAGCAGAATGTACCATCTAAAGAAGTTAAAGGTCTTCCTAGTTCTCCATCAACTGCATCACAAACGAAGCCTCGAATGCGTTGGACACCAGAACTTCACGAGGCCTTTGTGGAAGCGGTGAATCAGCTTGGTGGCAGCGAGAAGGCTACTCCCAAGGGGGTCTTGAACCTCATGAAAGTTAAGGGCCTTACGATCTACCATGTCAAAAGCCACCTACAGAAGTATAGAACGGCCAGGTACAAACCTGAGACCCCAGAAGGAACTTCTGAGAAAAAGCTAAGTTCAATTGAAGAAATGAAATCTCTAGACTTGAAAACGAGTAAGGGGATTACCGAGGCATTGCGGTTGCAAATGGAACTCCAGAAGCGGCTTCACGAGCAACTTGAGATCCAAAGGAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGCCTCCAGATGATGTTCGAGCAGCAGAGAGAGATGGGAGATAGCAAGTTTAAGGACTCCTCCTCTTCCTCCTTGGACGAGCCTTCCAATTCAGAAGCTCCAAAAGAGCAAAATGAGAAATTAGGAAGTGGAAGTTGCATAACGAAAGCCGGGCCAGGAGAAAGCTCTTGGGACGAAAGCACGAAGCAGGAAATGGCAGATGAAGCTCAAGTTAGTGTCCCACCACCCACAAAACGGGTCAAGACTTAA 1227 0.4564 MSSSSPVLPTPLDNKYMKPPDSFQLSPIREMTVNPSPLQSTSSNSNTRSTGHTFSSPGVVSFSSASQHERQHQPSSFVSQTLGEDSVSSELHSASFISQPQESDEISWGPDPFQDMLGFPENVSVQHDQVENGACYTNDDNVKQSDFGEWVDKLMSIDDSYDPNWSQLLGDDNESEPKPKPIQQQNVPSKEVKGLPSSPSTASQTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVKGLTIYHVKSHLQKYRTARYKPETPEGTSEKKLSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFEQQREMGDSKFKDSSSSSLDEPSNSEAPKEQNEKLGSGSCITKAGPGESSWDESTKQEMADEAQVSVPPPTKRVKT* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1107 408 Gene3D - 205 264 - -
Ahy16g1107 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 263 IPR017930 -
Ahy16g1107 408 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 260 IPR006447 GO:0003677
Ahy16g1107 408 MobiDBLite consensus disorder prediction 336 408 - -
Ahy16g1107 408 Pfam Myb-like DNA-binding domain 208 259 IPR001005 -
Ahy16g1107 408 MobiDBLite consensus disorder prediction 162 209 - -
Ahy16g1107 408 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 408 - -
Ahy16g1107 408 MobiDBLite consensus disorder prediction 348 370 - -
Ahy16g1107 408 MobiDBLite consensus disorder prediction 1 119 - -
Ahy16g1107 408 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 408 IPR044848 GO:0003700
Ahy16g1107 408 Coils Coil 294 314 - -
Ahy16g1107 408 MobiDBLite consensus disorder prediction 27 105 - -
Ahy16g1107 408 MobiDBLite consensus disorder prediction 179 208 - -
Ahy16g1107 408 Pfam MYB-CC type transfactor, LHEQLE motif 293 337 IPR025756 -
Ahy16g1107 408 SUPERFAMILY Homeodomain-like 204 260 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1107 Ahy-Chr16 20044243 20048012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1107 31 353 G2-like Transcription Factor Family AT3G04450 46.176 1.55e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy16g1107 Myb_DNA-binding 1.30E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1107 - - gmx:100803267 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1107 16 20044243 20048012 Ahy19g1672 19 62370112 62374320 ECH
Ahy16g1107 16 20044243 20048012 Ahy16g1107 16 20044243 20048012 ECH
Ahy16g1107 16 20044243 20048012 Ahy12g0989 12 21030820 21036357 PCT
Ahy16g1107 16 20044243 20048012 Ahy9g1320 9 45174350 45178775 PCT