Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1078 ATGGAAAGGGTGTTCTCAGTTGAGGAAATATCGGAGGCATTTATTCTGCCGGCGGCGAAGAGGATGGATGAGTTGACGGCGAAGTCAACGATGAACCGCAGCGCTTCAGAGTGGGCGTTCCAACGGTTTCTGCAAGAAGCTTCTTCGGCAGTATCAGCAACAGTGGCGTCGCCGTGTTCGTCGTCGTCTTCTGTGGTTGAGATCAAACAGGACCTCTCCCAAAACATGGAAACCAAGCCTCTTCAAAACGGCACCACCGTTGCCGTTTTGCCCAATGCCACTGCTTCTTCTTCTTCTTCTTCTGTCGCCGTTGATTCAGAGGATTACCAAGCTATCCTTAAGACCAAGCTCAAGCTCGCTTGCGCCGCCGTTGCTTTGACCAGGGGATCTTTGGTAAAATCTCAAGTTCCTGCCTCATTTTCTGAATGTACATCACAGGCAACTAATCTTTCTCAAGTTGCATCTCATGCTACTTTAAAAGGATCTGGCCCTTCTGGAAATGATTCATCTAAAGTACAAAATAAAGATGCCAAAGTACCAGTGGGGATTCCTTCCTTATCTGGTGTGCAAAATAAGCCTGCTGTTGCAATCAGATCAACCACAAGTGGATCGTCTAAAGACCAGTCAGATGATGAGGAAGCTGAGGAAGAGATTAATATGACTGAAAACATGGACCCTACTGATGCAAAACGAGTAAGGAGGATGCTTTCTAACAGAGAGTCTGCAAGACGCTCAAGACGAAGAAAGCAGGCTCATTTAACCGAGCTTGAGACACAGGTTTCTCAATTAAGAGGTGAAAATTCATCATTGTTAAAGCGTCTAACAGATATTAGCCACAAATACAATGATGCTGCTGTTGACAACAGAGTATTGAAAGCCGATGTTGAAACCTTAAGAGCAAAGGTAAAGATGGCTGAAGAAACTGTCAAAAGAATTACTGGGTTGAATCCAATGTTTCCAGCCATGGCTGATTTATCATCAATCAGAATGCCATCATTTGATGGAAGCCCTTCTGAGACATCAACTGATGCAGCAGTTCCTGTTCAAGAAGACACAAATCGTCACTTCTTTCAACGCACTTCAAACAATCCTATGTCGAGCCATGATCATGGAGTCAACAATTGGTTGGCAGACGTATCTTCAGACGAAAATGTGCAGCATAACGCCACCGCATCGACTGGTGGGAACAAGATGGACCGAACATCTTCCTTGCCAAGGGTGGCTAGCTTGGAACATCTTCAGAAGCGAATCCGTGGCAATGCAGATTCATCTGCTCCTGTTTCTAATGGAAAGCACCAATAA 1302 0.4524 MERVFSVEEISEAFILPAAKRMDELTAKSTMNRSASEWAFQRFLQEASSAVSATVASPCSSSSSVVEIKQDLSQNMETKPLQNGTTVAVLPNATASSSSSSVAVDSEDYQAILKTKLKLACAAVALTRGSLVKSQVPASFSECTSQATNLSQVASHATLKGSGPSGNDSSKVQNKDAKVPVGIPSLSGVQNKPAVAIRSTTSGSSKDQSDDEEAEEEINMTENMDPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDISHKYNDAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFPAMADLSSIRMPSFDGSPSETSTDAAVPVQEDTNRHFFQRTSNNPMSSHDHGVNNWLADVSSDENVQHNATASTGGNKMDRTSSLPRVASLEHLQKRIRGNADSSAPVSNGKHQ* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1078 433 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 233 248 IPR004827 GO:0003700|GO:0006355
Ahy16g1078 433 MobiDBLite consensus disorder prediction 387 433 - -
Ahy16g1078 433 PANTHER BASIC LEUCINE ZIPPER 63 1 413 - -
Ahy16g1078 433 MobiDBLite consensus disorder prediction 181 251 - -
Ahy16g1078 433 PANTHER BZIP TRANSCRIPTION FACTOR 1 413 - -
Ahy16g1078 433 Gene3D - 229 283 - -
Ahy16g1078 433 Pfam bZIP transcription factor 229 280 IPR004827 GO:0003700|GO:0006355
Ahy16g1078 433 SMART brlzneu 226 290 IPR004827 GO:0003700|GO:0006355
Ahy16g1078 433 MobiDBLite consensus disorder prediction 223 239 - -
Ahy16g1078 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 228 282 IPR004827 GO:0003700|GO:0006355
Ahy16g1078 433 MobiDBLite consensus disorder prediction 387 403 - -
Ahy16g1078 433 Coils Coil 288 308 - -
Ahy16g1078 433 Coils Coil 239 273 - -
Ahy16g1078 433 SUPERFAMILY Leucine zipper domain 230 280 IPR046347 GO:0003700|GO:0006355
Ahy16g1078 433 Pfam Basic leucine-zipper C terminal 297 420 IPR020983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1078 Ahy-Chr16 19494571 19497538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1078 1 319 bZIP Transcription Factor Family AT4G02640 39.820 6.32e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy16g1078 bZIP_C 4.60E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1078 K25784 - gmx:100170702 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1078 16 19494571 19497538 Ahy16g1078 16 19494571 19497538 ECH
Ahy16g1078 16 19494571 19497538 Ahy6g0307 6 3821136 3824172 hybridization