Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1057 ATGGGGAAGGCCGGTAAATGGATTAGAAACTTTCTTATGGGGAAAAAGGAGGATAAGTACAAGAAGATTGACGCAGTCTGTGCCGAGAGTAAGAGAGCTGCAGCGGATAGTCCCAAAGTGAAACGCAGATGGAGCTTCGGAAGACTAACAATTGGAAGAACATCAGGCAAGATGGCAGGGCATAAATTTTCCATATCTTTTGACTCCGGTGACTCTGCCAAACTGCAAGCTCAGACTCCAAGGAGGAGTCTTCCAATAGTAGAGTTCAAGGCTCCTAGTGACACCAGATCTAAAAATTCAGCAGCTACAATGATTCAAGCTGCCTTTCGCTCGTATCTGGCTAGGAAAGCATTGCATGCTTTAAAGGGATTAGTCAAGATACAAGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCTATGCTGCGCAGCATGCATGCGTTGATGACCATACAAGTTAGAGCTCGAATTCAAAGAATTCAGACGGTAGAGGAAGCAAATGTTCATGGAAAACAGCCTGTGCAACATACACAAATTCCACAGAGGAAAGGTCACATAAAAGAATATAAAGAACCGAAGGATATGACCATGGAAGAAATGCTGGAGGCTTTGAAAAGCAGAAGTCAGTCACTAGATCGCTCGCATTTTGAGGGAATAAAGCATGAATCCATGGCATTCTATTCGAAGCACAAGTCCGTTTCAGAAAGACAATTTGAGTACAATGATAACAGTTTAATCACAGCACCCAACAGCCCAGAAAACTACTGTGGCTTGTCGGAATATAACACAACAGCAATGGCCATGTCAACTCCTCGGCGACACCCCGTGTCTCACCGGCAATCACAATCCCCAAATTTCATGAACAATACAGTGTCTTCCAAGGCAAAAGCAAGGTCTCAGAGTGAGCCAAAACAACGTCCCAAATGGGGAAAGAGGCAGAAAAGCAGGTCCCCAGAATCTACCAAAGAACCTAGCACCTCACAAAATGGTCTAAGGCAAAATCTGCACTTAAACTCGTCACACATTGACCTTGGAAGTTTAGACTATTGGGTTGTCAACCTTTATGGGTCAACAACAAAGGACAGCTCCCGCAATTCTTTTGGCAGCAGCACGGTGACTAGTGATTCCTACTATTGA 1143 0.4444 MGKAGKWIRNFLMGKKEDKYKKIDAVCAESKRAAADSPKVKRRWSFGRLTIGRTSGKMAGHKFSISFDSGDSAKLQAQTPRRSLPIVEFKAPSDTRSKNSAATMIQAAFRSYLARKALHALKGLVKIQALVRGHLVRKQTTAMLRSMHALMTIQVRARIQRIQTVEEANVHGKQPVQHTQIPQRKGHIKEYKEPKDMTMEEMLEALKSRSQSLDRSHFEGIKHESMAFYSKHKSVSERQFEYNDNSLITAPNSPENYCGLSEYNTTAMAMSTPRRHPVSHRQSQSPNFMNNTVSSKAKARSQSEPKQRPKWGKRQKSRSPESTKEPSTSQNGLRQNLHLNSSHIDLGSLDYWVVNLYGSTTKDSSRNSFGSSTVTSDSYY* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1057 380 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Ahy16g1057 380 Pfam Protein of unknown function (DUF4005) 267 329 IPR025064 -
Ahy16g1057 380 Gene3D - 95 151 - -
Ahy16g1057 380 MobiDBLite consensus disorder prediction 271 334 - -
Ahy16g1057 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 145 IPR027417 -
Ahy16g1057 380 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Ahy16g1057 380 SMART iq_5 97 119 IPR000048 GO:0005515
Ahy16g1057 380 SMART iq_5 120 141 IPR000048 GO:0005515
Ahy16g1057 380 MobiDBLite consensus disorder prediction 271 300 - -
Ahy16g1057 380 MobiDBLite consensus disorder prediction 301 321 - -
Ahy16g1057 380 Pfam IQ calmodulin-binding motif 100 118 IPR000048 GO:0005515
Ahy16g1057 380 Pfam IQ calmodulin-binding motif 125 139 IPR000048 GO:0005515
Ahy16g1057 380 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 366 - -
Ahy16g1057 380 PANTHER IQ-DOMAIN 5-RELATED 1 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1057 Ahy-Chr16 19061476 19063100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1057 1 348 IQD Protein Family AT4G14750 35.519 3.37e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1057 - - lang:109345769 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1057 16 19061476 19063100 Ahy6g0326 6 4047557 4049340 hybridization