Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1052 ATGTTCGATGGATTGCCATCATCATCAGAACACTTCCACCAATTCATAACACCAAGGACCACTACTTCTACTACTCTTCCTCTTCCTCATCATCATCATCATCATCATCATTTATCACCATCATCATCATCATCATCTTCGTCCTTCTCCCCACTACTCCATCATCATGCTTCTCTAACCCCCATCAACACCAACACCTTCTTACCATTTGACCCTTATAACCCTCATCATCATCAACAACAACCAAATCCCACGTTTTCTTCGGTACTCAATAACAATAACTTGTTCCACACTAGTGCTACTGATGAAAGAGTTCAAACACAGGTATTACCAAACGACTTGATTGATTCTTCCTGGAGCAACGATGAAGTTGTTGCACTCTTGAGGATCAGATCAACCATGGACACTACTTGGTTCCCTCAACTCACTTATTGGGACCATGTCTCTAGAAAGCTAGGAGAGCTTGGATTCAAGAAGAGTGGTGACAAGTGCAAGGAAAAATTCGAAGACGAGACAAGATATTTCAACAACTACGCCAAGAACAATAGTTACCGATTTCTTAATGAGCTTGAAGAGTTCTATCAAGGTGATAATCATAATGAAAACCCTATGGTAGATAACCAAGATCATGTTGTGACTGAAAAGACTCAAGAGTTTGAACACCCAATCAATGCCGGAGGAGGCGATATAGAAGAAGTAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAAGAGGAGAGTTCAAGAGATGGCAAATCAGTGAAAGAACAATGTGAAGAAGACAATGACAGTGAGAAGAAGATGAAGATGAAGAGGAAGAGGAAGAGGCGTTGCAGGTTTGAGATGTTGAAGGGTTTCTGTGAGAGCATTGTGAACAACATGATGGCTCAACAAGAAGAGATACATAACAAGCTCATTCAAGACATGCTCAGAAGAGATGAAGAGAAGCTTCAAAGAGAGGAAGCATGGAAGAAGCAAGAGACTGAAAGGATGAACAAGGAGCTTCAGATTATGGCCCAAGAACAAGCCATTGCAGGTGACAGGCAAGCTTCCATCATTGAATTCTTGAAGAAATATGCAGCAACACAAACATTAACAACAAACCCTAATAATGATGAACCAACACCTTCTTCTTCAAAACTGATTATTCCATCAAGTCATCAAATTCAAAACAGTTCCGGATTATGTTCAATTCCACCATTATCAGCAGAAAACCCTAGCTCTATGAGTGACACATTATTACAACAAGTACATTCTTCTTCCACCCATTCATCTCCAGCTTCCCACAACAACACTACTAGTTCTTCCTCCCTCAACCGCCACGATAACTATCACTCAAATTCAATATCAACCATGCTTGTTAAGCCGTTAGTAACAGATCAGAAGGAGAATAATGTTGGAAGAAGATGGCCAAGAGATGAAGTTTTGGCTCTCATAAACCTCAGATGTGAGAGCATTAAGATGAATAATAATGCTGAAGAGAGGGAAAGTGGGAACAATAATAAGATTCCTCTATGGGAAAGAATCTCACAAGGGATGTCAGATTTGGGATACAAGAGAAGTGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAGGATGTTAACAAGAAAAGGTCCATTGATTCAAGGACTTGTCCCTACTTCCATCAACTCAAGAGTCTCTATGATGAAGGAAAGCTTGTTCATCAACCGGAGACGACGACGCCGGAAAACCATTCCGGGCAACTGCTTCCTCCGATAGAGTCTTCTGATCATGTGGGGTCTGGTGGCGGTTTCAGTGATGATCATGAGAAAACTTTGATACAAGAGCCACCATTGAATTTTGGTTAG 1851 0.4095 MFDGLPSSSEHFHQFITPRTTTSTTLPLPHHHHHHHHLSPSSSSSSSSFSPLLHHHASLTPINTNTFLPFDPYNPHHHQQQPNPTFSSVLNNNNLFHTSATDERVQTQVLPNDLIDSSWSNDEVVALLRIRSTMDTTWFPQLTYWDHVSRKLGELGFKKSGDKCKEKFEDETRYFNNYAKNNSYRFLNELEEFYQGDNHNENPMVDNQDHVVTEKTQEFEHPINAGGGDIEEVEEEEEEEEEEEESSRDGKSVKEQCEEDNDSEKKMKMKRKRKRRCRFEMLKGFCESIVNNMMAQQEEIHNKLIQDMLRRDEEKLQREEAWKKQETERMNKELQIMAQEQAIAGDRQASIIEFLKKYAATQTLTTNPNNDEPTPSSSKLIIPSSHQIQNSSGLCSIPPLSAENPSSMSDTLLQQVHSSSTHSSPASHNNTTSSSSLNRHDNYHSNSISTMLVKPLVTDQKENNVGRRWPRDEVLALINLRCESIKMNNNAEERESGNNNKIPLWERISQGMSDLGYKRSAKRCKEKWENINKYFRKTKDVNKKRSIDSRTCPYFHQLKSLYDEGKLVHQPETTTPENHSGQLLPPIESSDHVGSGGGFSDDHEKTLIQEPPLNFG* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1052 616 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 42 578 - -
Ahy16g1052 616 MobiDBLite consensus disorder prediction 21 50 - -
Ahy16g1052 616 MobiDBLite consensus disorder prediction 390 443 - -
Ahy16g1052 616 MobiDBLite consensus disorder prediction 219 270 - -
Ahy16g1052 616 ProSiteProfiles Myb-like domain profile. 461 532 IPR001005 -
Ahy16g1052 616 Pfam Myb/SANT-like DNA-binding domain 467 561 IPR044822 -
Ahy16g1052 616 Pfam Myb/SANT-like DNA-binding domain 117 182 IPR044822 -
Ahy16g1052 616 CDD GT1 467 539 - -
Ahy16g1052 616 MobiDBLite consensus disorder prediction 229 246 - -
Ahy16g1052 616 MobiDBLite consensus disorder prediction 570 616 - -
Ahy16g1052 616 Coils Coil 223 250 - -
Ahy16g1052 616 SMART sant 465 534 IPR001005 -
Ahy16g1052 616 SMART sant 115 174 IPR001005 -
Ahy16g1052 616 Gene3D - 469 537 - -
Ahy16g1052 616 Gene3D - 119 177 - -
Ahy16g1052 616 ProSiteProfiles Myb-like domain profile. 111 172 IPR001005 -
Ahy16g1052 616 MobiDBLite consensus disorder prediction 571 585 - -
Ahy16g1052 616 MobiDBLite consensus disorder prediction 247 267 - -
Ahy16g1052 616 PANTHER - 42 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1052 Ahy-Chr16 18951492 18954351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1052 119 598 Trihelix Transcription Factor Family AT5G28300 39.444 4.09e-89 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy16g1052 Myb_DNA-bind_4 7.00E-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1052 - - aip:107645832 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1052 16 18951492 18954351 Ahy16g1052 16 18951492 18954351 ECH
Ahy16g1052 16 18951492 18954351 Ahy6g0328 6 4078149 4080941 hybridization