Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1038 ATGATGGCATCGGAGCAACACGACACCGTTTTCCCAGACGAAGACATGGACGAAGACGACGAGGAGTCCCAAGAGGACGAAGAAGAGGAAGACATCGATGACGACGACGTTTTGCCAGACGACGAAGAAAACGAGCCCTCTCCCTCTACCTCGTCCGCTGCCCTCGCCGTCACCGTCGCCGTTCCCTCCTCCGTCATCCCCAACGGCGAAAAGGCTCCAATTTCAACCCCCACTGCCAACGCGGCCACCACCGTGGTCGTTGCCCTCGAAGGCAGCTCCTCCGATCCGAAACGGCAGCAACAAATCGAGGAGAAGAAGCCGCTCGACGATTCACGGAGGCTGTTCCAGCGGCTGTGGACGGACGAGGATGAGATCGAGCTTCTGCAAGGGTTTCTCGAGTACACATCGCAGCGAGGTTCCTCTCACCACAACGACACTGCTTTGTTCTACGACCAAATTAAGTCGAAGCTTCAGCTGGATTTCAACAAGAACCAGCTTGTGGAGAAGATCCGGAGGTTGAAGAAGAAGTACCGCAACGTTCTCAACAAGATTGGTTCCGGCAAGGAATTCAACTTTAAGAGCGCTCACGATCAAGCCACCTTCGAGATTTCACGCAAGATCTGGAGCAACTTGGGTCCAGTGGCTGATAATGCCTTGGACGACGACGAAATCAACCTCAATCCCAATCCTAACCCTAACCCTAACCTCAATTTTACCTTCGCACTCCCCGCGCCCAGGACTGAGACGCTCTTCGGGAATTCCTCCGAGAAGAAAACGCCGCCTTCGCGGAAGCGATCACGGCCGCGATCATCCGCTGCGACGACGGTGAAAATCGAAGAGAGGCGCGAGTCATTGGATGGATCGGCGTCACATAAAGAGCATAACTTTAATCTCAACGCTGCCGCTACAGGTCTCCCTGCAACGCCAAACAATAACTGTGAGAGTAACAAGTGTAGCGGTGGATATGGCATACCGGGTTTGGTTGAAGAGACGGTGAGGAGTTGTTTGTCGCCGTTGGTGAAGGAATTGGTGGGTGGCGCTGCCATGGGAGGTGGTCACTTTGGCGGAAGAGGGTTTGGAGGTGGAGGCTTTTCACTGAACCCCATTCCATTGGGGTTCGGAGCGATGAATAATTTGGGTTTGGGTTTGGGTGGTGGAGAACTAGTGGATGAGAGATGGAGGAAGCAGCAAATATTGGAATTGGAAGTGTACTCCAAGAGGCTGGAACTGGTTCAGGAACAGATCAAAGCTGCTCTCGAGGAATTGCGTTCAACGGCAGGAAGCTGA 1287 0.5369 MMASEQHDTVFPDEDMDEDDEESQEDEEEEDIDDDDVLPDDEENEPSPSTSSAALAVTVAVPSSVIPNGEKAPISTPTANAATTVVVALEGSSSDPKRQQQIEEKKPLDDSRRLFQRLWTDEDEIELLQGFLEYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFNFKSAHDQATFEISRKIWSNLGPVADNALDDDEINLNPNPNPNPNLNFTFALPAPRTETLFGNSSEKKTPPSRKRSRPRSSAATTVKIEERRESLDGSASHKEHNFNLNAAATGLPATPNNNCESNKCSGGYGIPGLVEETVRSCLSPLVKELVGGAAMGGGHFGGRGFGGGGFSLNPIPLGFGAMNNLGLGLGGGELVDERWRKQQILELEVYSKRLELVQEQIKAALEELRSTAGS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1038 428 MobiDBLite consensus disorder prediction 1 56 - -
Ahy16g1038 428 PANTHER BNAANNG10740D PROTEIN 2 425 - -
Ahy16g1038 428 Coils Coil 401 425 - -
Ahy16g1038 428 MobiDBLite consensus disorder prediction 249 292 - -
Ahy16g1038 428 MobiDBLite consensus disorder prediction 11 43 - -
Ahy16g1038 428 PANTHER BNAANNG10740D PROTEIN-RELATED 2 425 IPR007592 GO:0006355
Ahy16g1038 428 Coils Coil 163 183 - -
Ahy16g1038 428 Pfam Protein of unknown function, DUF573 115 209 IPR007592 GO:0006355
Ahy16g1038 428 MobiDBLite consensus disorder prediction 274 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1038 Ahy-Chr16 18799530 18801933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1038 2 424 GeBP Transcription Factor Family AT5G28040 43.384 6.30e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ahy16g1038 DUF573 3.40E-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1038 - - gmx:100779712 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1038 16 18799530 18801933 Ahy6g0337 6 4144023 4145999 hybridization
Ahy16g1038 16 18799530 18801933 Ahy9g1356 9 54668857 54670380 PCT
Ahy9g1356 9 54668857 54670380 Ahy16g1038 16 18799530 18801933 PCT