Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1028 ATGGTTTCATCATCATCTCCCTCTATAGTGTTTACAGTGAAAAGGTGCGAACCAGAGCTAGTGGCTCCGGCCTCGCCCACTCCCCATGAAGTTAAACAACTATCAGACATAGATGATCAAGAAGGGCTACGTTACCAACTTCCAATCATAAATATATATCGTCACAATCCATCAATAGAAGGAAAAGACCCAGTAAAGGTGATAAGAGATGCACTCTCAAGAACACTTGTGTTTTACTACCCATTTGCCGGTAGGCTTAGGGAGGGTCATGGCGGCAAGTTGATGGTTGATTGCACTGCAGAGGGTGTATTGTTCATTGAGGCCGATGCTGACGTGCCACTTGATCAACTTGGTGAAGCTCTTCAACCTCCATTCCCTTGCTATAAGGAATTGCTTTACAATGTTCCTGGCTCAGATGGAATTGTCGGCTGTCCCCTTCTACTCTTACAGGTCACACGCTTTAAGTGCGGCGGTTTTTCTGTCGGCATACGGGTGAACCACACGATGGTAGATGCAACTGGTATTGTGCAATTCATGAACGCCATGGCTGAAATCTCTCGAGGGTCTCATCAACCTTCCATTCTACCCGTTTGGTGTAGGGAGCTTCTAACTGCAAGAGACCCGCCACGCATCACATGCAACCATCGAGAATTTGAGGAAGCAAAAGATATTAAGGAATGGGAAACCATTATTGATGACAAAAACATGATTAAACGAAATTTCTTCTTTGGACCCACTGAAATAGCTTCTCTTCGCTGCTTGACTCTAAATCAATCCGCTGAATGTACTGGATTTGAGCTCATCACTGCATGCCTCTGGTATTGTCTTGTAAAAGCATTGCAACTACCACCAGAAAAAGAAGTTCGAATGTATTGTGTCGTCAATGCTCGTGCTAGATTTAACCCTCCCATGCCAATCGGTTATTATGGAAACGCTATATCATTTCCGGCGGCGGTCTCCACCGTAGAGAAGCTATGTGAAAATCCATTTGAATATATTGTGAAGTTAATAAAAAAAGCGAAAGCCGAGACAACAGAAGAATACATGCATTCTTTAGCAGATTTAATGGTGATTAAGGGACGACCTTTGACTACAAGAGCATGGTCTTTTCTTGTGTCAAAGGTGACACGTATTGGGTTTAGAAAAGTGGATTTTGGGTGGGGAAATGCAGTGTATGGTGGGATAAGTGGCGACAAGATTTTTGGAGAACTCACTCTCATGGATTGTGAGAATGCAAATGGAGAAGAAGGTGTTATAGTTCCACTTTACTTGCCTGCCAATGCTATGAAGAGGTTTGCAAAAGAAATGGATGATTTGCTTCTGATCCCAAATCAGAATTGCAAATAA 1347 0.4313 MVSSSSPSIVFTVKRCEPELVAPASPTPHEVKQLSDIDDQEGLRYQLPIINIYRHNPSIEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGGKLMVDCTAEGVLFIEADADVPLDQLGEALQPPFPCYKELLYNVPGSDGIVGCPLLLLQVTRFKCGGFSVGIRVNHTMVDATGIVQFMNAMAEISRGSHQPSILPVWCRELLTARDPPRITCNHREFEEAKDIKEWETIIDDKNMIKRNFFFGPTEIASLRCLTLNQSAECTGFELITACLWYCLVKALQLPPEKEVRMYCVVNARARFNPPMPIGYYGNAISFPAAVSTVEKLCENPFEYIVKLIKKAKAETTEEYMHSLADLMVIKGRPLTTRAWSFLVSKVTRIGFRKVDFGWGNAVYGGISGDKIFGELTLMDCENANGEEGVIVPLYLPANAMKRFAKEMDDLLLIPNQNCK* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1028 448 Gene3D - 12 217 IPR023213 -
Ahy16g1028 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 440 - -
Ahy16g1028 448 Gene3D - 218 436 IPR023213 -
Ahy16g1028 448 PANTHER ALCOHOL ACYLTRANSFERASE 11 440 - -
Ahy16g1028 448 Pfam Transferase family 13 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1028 Ahy-Chr16 18585243 18587543 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1028 20 434 Monolignol Biosynthesis Gene Families AT5G48930 28.337 5.13e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1028 K19861 - gmx:100787907 563.918