Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1020 ATGGGGTGTGTGATTAGCAGGGAGGTGTCTTCTGGAATAATCGCAGAGGTGAAAGAGGAGAAGAGTTTCGGTGCTGATTCTAAGAGCAATAATAAGGTTGATGGAGTCGCGGAAGAGGCTCAGAATCAGAATCGGAATCACAATGGTGGTAACCACAGGGAAGAGAAGAGTGGCAGCGAAGTTCAGAAGCCGAGGGGAGAAAGGAGAAGATCGAAGAAACCGAATCCGCGGCTAAGCAATCCTCCCAAGCATTTAAGGGGTGAGCAGGTTGCGGCTGGCTGGCCACCCTGGCTCACCGCCGTGTGCGGCGAAGCGCTTAACGGCTGGATTCCCCGAAAGGCTGACACATTTGAGAAGATTGATAAGATCGGGCAAGGAACATATAGTAATGTGTACAAAGCTAAAGACATGATGACAGGCAAAATTGTTGCTCTAAAGAAGGTTCGATTTGATAATTTGGAACCTGAGAGTGTAAAATTCATGGCTAGAGAGATTCTTATTTTGCGGAGGTTGGATCATCCAAATGTTGTAAAGTTGCAAGGCTTAGTTACATCAAGGATGTCCTGCAGTCTGTATTTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGTTGCGAGCCCACGAATCAGGTTCACGGAACCTCAGGTCAAATGTTACATGCATCAACTGCTATCTGGACTTGAGCATTGTCATAAGCGTCGTGTACTTCACCGAGATATTAAAGGATCAAATCTTCTCATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGACTGGCATCTTTGTTCGATCCAAACCATAAGCATCCCATGACTAGTCGAGTAGTAACTCTTTGGTACCGGCCCCCAGAATTGCTTCTTGGTGCCACCGATTATGGTGTGGGTATAGACCTATGGAGCGCCGGATGCATTTTAGGAGAGTTATTGGCTGGAAAGCCAATTATGCCGGGTCGTACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCTTCTGATGAATATTGGAAGAAGTCGAAGTTGCCTAACGCCACCTTGTTTAAGCCTCGAGAGCCATACAAGAGATGCCTAAGAGAGACATTTAAAGATTTTCCACCTTCTGCACTACCCCTTATCGAAAGTCTTCTGGCATTTGATCCTGCCGAACGGAAAACTGCCTCAGATGCTTTGCGAAGTGAGTTCTTCACCACAGAGCCATATGCTTGTGATCCTTCAAGTCTTCCAAAATATCCTCCAAGCAAGGAAATGGATGCTAGACGGCAGGACGAAGAGGCCAGAAGAATAAGGGCTGCAAGCAAAGCTCAGGCTAATGGTCCAAGGAAGCATCGCATGCGTGATCGTGCCGTGAAAGCTATTCCTGCTCCTGAAGCCAATGCTGAGATTCAATCCAACATTGATAGAAGGCGTCTAATAACTCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCACCGCCACATCAAGATGGACAACTTGGATTTCCATTGGGATCTTCCCATCGTATTGATCCAGATACTGTTCCTATTGATGTCTCCTTCACTTCAACAACGTCGTATATTTATTCAAAGGAACCATTCCAAGCGTGGTCAGGTCCCATAGGTAATGCTGCTGCTGAAATTGGAGTGCCAAAAAACAAGAGACACACCGCAACTGATGCATTGGATTTATCAAAACCACATAAAGGTTCACACAAGGATAAAGTTAAAGGAAAGAAAACCATAGCTTAG 1746 0.453 MGCVISREVSSGIIAEVKEEKSFGADSKSNNKVDGVAEEAQNQNRNHNGGNHREEKSGSEVQKPRGERRRSKKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDMMTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMVHDLAGLVASPRIRFTEPQVKCYMHQLLSGLEHCHKRRVLHRDIKGSNLLIDNEGILKIADFGLASLFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCLRETFKDFPPSALPLIESLLAFDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDARRQDEEARRIRAASKAQANGPRKHRMRDRAVKAIPAPEANAEIQSNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHRIDPDTVPIDVSFTSTTSYIYSKEPFQAWSGPIGNAAAEIGVPKNKRHTATDALDLSKPHKGSHKDKVKGKKTIA* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1020 581 PANTHER CELL DIVISION PROTEIN KINASE 48 554 - -
Ahy16g1020 581 MobiDBLite consensus disorder prediction 419 436 - -
Ahy16g1020 581 MobiDBLite consensus disorder prediction 48 67 - -
Ahy16g1020 581 Gene3D Phosphorylase Kinase; domain 1 104 199 - -
Ahy16g1020 581 SMART serkin_6 117 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1020 581 MobiDBLite consensus disorder prediction 551 568 - -
Ahy16g1020 581 MobiDBLite consensus disorder prediction 409 451 - -
Ahy16g1020 581 Pfam Protein kinase domain 117 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1020 581 CDD STKc_CDK9_like 117 401 - -
Ahy16g1020 581 SUPERFAMILY Protein kinase-like (PK-like) 111 408 IPR011009 -
Ahy16g1020 581 Gene3D Transferase(Phosphotransferase) domain 1 200 441 - -
Ahy16g1020 581 PANTHER OS01G0367700 PROTEIN 48 554 - -
Ahy16g1020 581 MobiDBLite consensus disorder prediction 15 89 - -
Ahy16g1020 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Ahy16g1020 581 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Ahy16g1020 581 MobiDBLite consensus disorder prediction 550 581 - -
Ahy16g1020 581 ProSiteProfiles Protein kinase domain profile. 117 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1020 Ahy-Chr16 18440122 18444222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1020 109 441 Core Cell Cycle Gene Families AT5G10270 52.722 7.70e-122 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy16g1020 Pkinase 2.90E-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1020 K08819 - gmx:100786837 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1020 16 18440122 18444222 Ahy19g1606 19 52437251 52444281 ECH
Ahy16g1020 16 18440122 18444222 Ahy16g1020 16 18440122 18444222 ECH
Ahy16g1020 16 18440122 18444222 Ahy6g0353 6 4372625 4376693 hybridization
Ahy16g1020 16 18440122 18444222 Ahy19g1606 19 52437251 52444281 PCT
Ahy16g1020 16 18440122 18444222 Ahy9g1299 9 40851622 40857411 PCT
Ahy19g1606 19 52437251 52444281 Ahy16g1020 16 18440122 18444222 PCT
Ahy9g1299 9 40851622 40857411 Ahy16g1020 16 18440122 18444222 PCT