Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1018 ATGGGTGCGCCGAAGAAGAGCGGCGGCGGAGGCGGAGGCAGGGTTTCCGTCACAGAGGATTCCGACGAACTGGTTCGTGTTCCGTTGCAGGCCATCCTCTTAGCTGATAGCTTCAACACCAAGTTCAGACCTATCACACTCGAATGCCCGAAGGTCCTCTTGCCTCTTGTCAATGTTCCGATGATCAATTACACCTTGACCTGGCTCGAATCCGCCGGCGTCGAAGACGTTTTCGTTTTCTGCTGCGCCCATTCCAAGCAAGTCATCGACTATTTGGACAAATCCGGTTGGCTCTCTCAGCCTAATTTCTCCGTAACCACCATTGAATCGCACAATTCCGTCAGCGCCGGTGACGCCCTCCGCCTAATCTACGAGCGTAACGTGATTCATGGAGACTTTATCCTCATCAGTGGTGATACTGTGAGCAACATGTCGCTTACTCAGGCACTTGCAGAGCACAAAGAAAGGAAGAAGAAGGATAGTAATGCCGTCATGACAATGGTTATCAAACGCTCAAAAACTAACCCCGCTATTCATCAGTCTCGGCTTGGTACCGATGAGCTTTTCATGGCCATTAATCCGGATACCAAGCAGCTTTTGTATTATGAGGAGAGGACTGACCTTTCCAAAGGGATTATGCATCTTGACAAGTCATTTCTTGCTGATAACCCTTCCCTCACCTTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCGCCTGAAGTCCTTAGCCTGTTTACGGACAATTTTGATTACCAACATCTGCGGCGTCATTTTGTGAAGGGGTTGCTTGTTGATGATATAATGGGGTACAAAATTTTCGTGCATGAAATCCACTCAAACTATGCTTCACGGATTGATAATTTCCGGAGCTATGACACTGTTAGCAGGGATATAATTCATAGATGGACATATCCAATGGTGCCAGATGTTATGAATTATGGCAACACAGCTACTAAACTTGAACGACAGGGAATGTATCGTGCTTCAGAAATATCACAATCACAATCCGCTGTTATTGGTCCCTTCACTGTTCTAGGATTTGGCACCAAAATTGGGAATAACACTATAATTTCGGATTCCGTTATTGGAAAAGGATGTAAAATTGGATCAAACGTTCAGATTAAAGGTTGCTACATATGGGACCATGTCACCATAGAAGATGGCTGTAAACTTAACCATGCTATTGTTTGTAATGAGGTGACTTTGAAGTCAGGAGCTGTTCTGGAACCTGGTGTTATTTTGTCATTCAAGGTTGTAGTTGGGCCAGAGTTTGTTGTCCCTCCTTATTCATATGTATCACTATTACAACAGCCTGTTGAGGAAGACAGTGATGAGGAGCTTGAATATGCTGACAGTACTAGCGTCATCACAAGCAAAGTGGATAAGTCGGATGAAGAGGATGCATCTGAAGTACCAGAGGCACGTATTAGCTCTGTTTCAGAGCTAGGTATGGGTGGGGTTGGTTACATTTGGCAAAAATGTGAAGGAAGCCAGGAAGAAGAGTGGAGGCATTCAGTGGCACCTATTCCTGCAGATAAAATTTCTGAGGCAATGAAAACCATGGAAGATGATCTGGAGTTAACTCATGATGGCAGTATTCTCCCACCTTCTGGAGAGCTGATACCTGATTCTAATGACTCAGATGAAGATAATGAAGACTCCAGGGATGATTTCTTTGAGAGAGAGGTTGAAGCGACATTCCTCAGGGCTGTGAATGAAAACATACAAGAAGACCACTTGATCTTAGAAGTTAACTCTTTGAAGTTGTCATGCAATAAGCTGACTGCTGATTGTGCGGGAGCTGTGTTTTATGCTATGATGAAGTATGCGGTAGACACTCCCCATAGTTCACTTGATGGCTTGATGCAGAATGTTAACGATGTTCTATCAAAATGGAAAAAGGCTCTTACATCCTATCTGACAGACATAGATGAGCAGATTGAGATCATACTGAAATTTGAAGAAATTTGTTTAGAATCTGCTAGGGAGTTTGCTCCATTATTCACTAAGATTTTGCTCCACTTGTATAAGGAGGATATTATTGAAGAAGATGCTATTTTAAGTTGGGAAGATGAGAAGAGAGATGCAGATGAGGCAGATAAAGTATTTGTTAACAAGGCTCAAGAATTTATCCAATGGCTAAAAGTGGCTGAAGAAGAAGATGAATAG 2178 0.4339 MGAPKKSGGGGGGRVSVTEDSDELVRVPLQAILLADSFNTKFRPITLECPKVLLPLVNVPMINYTLTWLESAGVEDVFVFCCAHSKQVIDYLDKSGWLSQPNFSVTTIESHNSVSAGDALRLIYERNVIHGDFILISGDTVSNMSLTQALAEHKERKKKDSNAVMTMVIKRSKTNPAIHQSRLGTDELFMAINPDTKQLLYYEERTDLSKGIMHLDKSFLADNPSLTLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFVHEIHSNYASRIDNFRSYDTVSRDIIHRWTYPMVPDVMNYGNTATKLERQGMYRASEISQSQSAVIGPFTVLGFGTKIGNNTIISDSVIGKGCKIGSNVQIKGCYIWDHVTIEDGCKLNHAIVCNEVTLKSGAVLEPGVILSFKVVVGPEFVVPPYSYVSLLQQPVEEDSDEELEYADSTSVITSKVDKSDEEDASEVPEARISSVSELGMGGVGYIWQKCEGSQEEEWRHSVAPIPADKISEAMKTMEDDLELTHDGSILPPSGELIPDSNDSDEDNEDSRDDFFEREVEATFLRAVNENIQEDHLILEVNSLKLSCNKLTADCAGAVFYAMMKYAVDTPHSSLDGLMQNVNDVLSKWKKALTSYLTDIDEQIEIILKFEEICLESAREFAPLFTKILLHLYKEDIIEEDAILSWEDEKRDADEADKVFVNKAQEFIQWLKVAEEEDE* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1018 725 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 375 IPR029044 -
Ahy16g1018 725 CDD W2_eIF2B_epsilon 559 725 IPR044123 GO:0005085|GO:0031369
Ahy16g1018 725 SUPERFAMILY Trimeric LpxA-like enzymes 274 435 IPR011004 -
Ahy16g1018 725 SMART 542_3 636 723 IPR003307 GO:0005515
Ahy16g1018 725 Gene3D - 549 725 - -
Ahy16g1018 725 SUPERFAMILY ARM repeat 562 721 IPR016024 -
Ahy16g1018 725 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 18 309 IPR029044 -
Ahy16g1018 725 Gene3D Hexapeptide repeat proteins 325 464 - -
Ahy16g1018 725 CDD LbH_eIF2B_epsilon 347 425 - -
Ahy16g1018 725 CDD eIF-2B_epsilon_N 29 245 IPR035543 -
Ahy16g1018 725 ProSiteProfiles W2 domain profile. 556 725 IPR003307 GO:0005515
Ahy16g1018 725 MobiDBLite consensus disorder prediction 531 559 - -
Ahy16g1018 725 Pfam eIF4-gamma/eIF5/eIF2-epsilon 648 725 IPR003307 GO:0005515
Ahy16g1018 725 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 17 724 - -
Ahy16g1018 725 Pfam Nucleotidyl transferase 31 170 IPR005835 GO:0009058|GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1018 Ahy-Chr16 18383524 18389765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1018 1 720 Eukaryotic Initiation Factors Gene Family AT2G34970 61.210 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1018 K03240 - gmx:100784894 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1018 16 18383524 18389765 Ahy6g0355 6 4397818 4403832 hybridization