Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1017 ATGGCTATTGATCATATAAGTTCTCTGTTTGCGAAATTGCAAGCATTATCGACTTCAGATCATGGCTCCGTTGTGTCCATGAACATATTTGTGGCACTTCTGTGTGCTTGTATTGTCATTGGACATCTTCTTGAGGAAAATCGCTGGATGAATGAGTCCATCACTGCCCTTGTCATAGGAATATGCACCGGCATACTCATTTTGATGCTTAGCGGTGGTAGAAGCTCTCATATTCTTGTTTTCAGCGAAGACCTTTTCTTCATATACCTTCTGCCACCTATCATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTTAACTTTATCACCATCATGATGTTTGGTGCTATTGGTACATTGATAAGTTGTGCCATCATAACTTACGGTGTCGCAAAAACTTTTAAGAGGATCGGAATTCGTTCACTGGAGATTGCGGATTATCTAGCAATTGGTGCAATATTTTCTGCTACCGATTCTGTGTGCACCTTACAGGTGCTAAATCAGGATGAGACACCTTTATTGTACAGTCTTGTATTTGGAGAGGGTGTTGTAAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAAAGTTTTGACATCAACCAAATTAATCCATCAATAGGGTTGCATTTCTTTGGCAACTTCTTGTACCTATTTACCACAAGCACTCTTCTTGGGGTTTTTACTGGTCTACTCAGTGCTTACATTATTAAGAAGCTTTACATTGGCAGGCACTCAACAAATCGTGAGTTTGCTCTGATGATGCTAATGGCATACCTTTCCTACATGATGGCTGAATTATGCTATCTGAGTGGAATTCTCACTGTGTTCTTTTGTGGGATTACAATGTCTCACTATACTTGGCATAATGTGTCTGAAAGCTCAAGAATCACTACCAAACATGCTTTTGCTACTTTGTCATTTGTTGCCGAGACTTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAGGTTTGCCAGCGACAGGCCTGCAACTTCCCTTGCTGTGAGCTCAGTATTGTTGGGTCTAGTACTTGCTGGAAGAGCAGCATTTGTTTTCCTCTTATCATTCATATCCAACATCACTAGGAAGTCATCAAAAGAGGGCATAAGCTTCAGGCAGCAGGTGATTATTTGGTGGGCTGGTCTTATGAGAGGAGCTGTTTCAATGGCACTTGCTTATAATCAGTTCACCTTGTTAGGGCATACTGCAAAGCGAGCGAATGCCATTATGATCACCAGCACCATCACTGTTGTGTTAGTCAGTACAGTGGTGTTCGGTTTGATGACAAAGCCATTAATAAGGTTTTTGCTGCCTGTGCCCAGCGGCCTTACGCCGAAACGGAAAAACAGCACCGCGAACATAGTAGATTCAGCTTCTCCAAAAGCTAACACAGTACCATTTCTCTCGAATGGCGCAGACTCTGAAGCAAATCTTGAACCCCAAGAAAGTTCTTATGGTCGAACTCCAAGAAGCATTCGTGACTTACTATCCACTCCCACACACTCTGTTCATCGCTTATGGCGCAAATTCGATAACTCGTTTATGCGTCCAGTTTTTGGTGGCAGGGGCTTTGTTCCAATCGAACGCGGTACACCAACCGAACGCAACACCCAAAATCAGTGGCATTGA 1659 0.4231 MAIDHISSLFAKLQALSTSDHGSVVSMNIFVALLCACIVIGHLLEENRWMNESITALVIGICTGILILMLSGGRSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMMFGAIGTLISCAIITYGVAKTFKRIGIRSLEIADYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDINQINPSIGLHFFGNFLYLFTTSTLLGVFTGLLSAYIIKKLYIGRHSTNREFALMMLMAYLSYMMAELCYLSGILTVFFCGITMSHYTWHNVSESSRITTKHAFATLSFVAETFIFLYVGMDALDIDKWRFASDRPATSLAVSSVLLGLVLAGRAAFVFLLSFISNITRKSSKEGISFRQQVIIWWAGLMRGAVSMALAYNQFTLLGHTAKRANAIMITSTITVVLVSTVVFGLMTKPLIRFLLPVPSGLTPKRKNSTANIVDSASPKANTVPFLSNGADSEANLEPQESSYGRTPRSIRDLLSTPTHSVHRLWRKFDNSFMRPVFGGRGFVPIERGTPTERNTQNQWH* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1017 552 PANTHER SODIUM/HYDROGEN EXCHANGER 8 551 IPR018422 GO:0006812|GO:0015299|GO:0016021
Ahy16g1017 552 Gene3D - 146 198 - -
Ahy16g1017 552 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 29 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ahy16g1017 552 MobiDBLite consensus disorder prediction 479 503 - -
Ahy16g1017 552 Pfam Sodium/hydrogen exchanger family 29 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ahy16g1017 552 PANTHER SODIUM/HYDROGEN EXCHANGER 2 8 551 - -
Ahy16g1017 552 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ahy16g1017 552 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ahy16g1017 552 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ahy16g1017 552 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1017 Ahy-Chr16 18377507 18383155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1017 7 549 Antiporters AT3G05030 69.245 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1017 - - aip:107645855 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1017 16 18377507 18383155 Ahy16g1017 16 18377507 18383155 ECH
Ahy16g1017 16 18377507 18383155 Ahy6g0356 6 4404205 4410210 hybridization
Ahy16g1017 16 18377507 18383155 Ahy19g1595 19 51829526 51836124 PCT
Ahy16g1017 16 18377507 18383155 Ahy9g1291 9 40269636 40276175 PCT
Ahy19g1595 19 51829526 51836124 Ahy16g1017 16 18377507 18383155 PCT
Ahy9g1291 9 40269636 40276175 Ahy16g1017 16 18377507 18383155 PCT