Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0999 ATGGCCAGCAGATTTTGGTTTGGAAAGAAGAAAAGTAGTAGCAGCCATGGTGGCGGTTCAGAAAAGAAGTTCTCATTGGACGATGCTTCTCTCGCCGCAAAACCCAGAAGGCGAACCAGCTTCTTGTTTTCTTCTCCTTCTCCACTGCAAGGGTCGAGGCACATTGAGAGGGATAATAGATCCTTAACCCCAACAAGATCTGAATATTCCGTATCAACAACACCACCACCCTTTCCCTTTCGACAACATCATCATCATGATGAAGATTCATTGCCTCCACCAGCCACTTGTTTAAGCTTCAAATGGAAAAATATCTTTAAGCCATGGAAGAAGAAGAATAATAATAATATAAGATCATCATCACCATCAACTACTAGGCCCTCTCCTCCTCCTCCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCACCGCCGCTGCCAAACCGAGGCCATGGCAACTTTAATTTTCCTCCGCTCATCGCTTTCAGATCCTTCCAAATTCGTCATGCAACCAACAATTTTAGCAGAGAGAATTTAATTGGAAGAGGTGGGTATGCTGATGTTTTCAAGGGTCGTCTGAATGGGGAAATGGTAGCTATAAAAAAATTGAACAAAGGGATTAATGCTGCAAATAAGAACTCGCCGTCGCCGTCCTCCTCGTCGTCGTCGACGTCATCATCGTCAAGCTTTCTGAAAGAGCTAAACATCATTGCCTACATCGACCATCCTAATACTGCAAAGCTTATTGGATACAGTTCAGAAAAGGAATTCTGCCTCGTCTTCCAACTTTCTCCACTTGGAAGTTTAGCTTCTATTCTCCATGGTCCAAATAGGCACATATTAACTTGGAATAGAAGGTATAATATTGCGCTGGGAATAGCAAGAGGGCTGTTGTACTTGCATGATCATTGTCACAGGCGAATCATTCATAGAGATATTAAATCTGATAATATTCTGCTCACTAAAAATTTTGAGCCACAGATTTGTGATTTTGGGCTTGCAAAGTGGTTGCCACCAGATGCTGATCAGCAACATGTCACAAAATTTGAAGGCACATTTGGGTATTCTGCTCCTGAATATTTGACGCATGGAATAGTAGATGAGAAAACAGATGTTTATGCATTTGGGATCCTGTTGCTGGAGATTTTAACCGGGCGTAAGGCCTTGGATTATTTGCAACAAAGCATTTTGATATGGGCAAAGCCATTAATTGATGCTCATAATGTTAAGGAGCTTGTTGATCCATCACTTGGTGAAGATTATGACATAGAGCAGGTGGAACGTCTTCTTTTGACTGCTTCTCTCTGTGTTGAGCATTCTCCATTCTTGCGTCCTCGCATGGTTCAGGTGAAAGAAGCTCTACATGAGAAAGTTGTAACTTCATCGCCATCTTTGTCATAA 1419 0.4306 MASRFWFGKKKSSSSHGGGSEKKFSLDDASLAAKPRRRTSFLFSSPSPLQGSRHIERDNRSLTPTRSEYSVSTTPPPFPFRQHHHHDEDSLPPPATCLSFKWKNIFKPWKKKNNNNIRSSSPSTTRPSPPPPSSSSPPPPPPPPPPPPPPPLPNRGHGNFNFPPLIAFRSFQIRHATNNFSRENLIGRGGYADVFKGRLNGEMVAIKKLNKGINAANKNSPSPSSSSSSTSSSSSFLKELNIIAYIDHPNTAKLIGYSSEKEFCLVFQLSPLGSLASILHGPNRHILTWNRRYNIALGIARGLLYLHDHCHRRIIHRDIKSDNILLTKNFEPQICDFGLAKWLPPDADQQHVTKFEGTFGYSAPEYLTHGIVDEKTDVYAFGILLLEILTGRKALDYLQQSILIWAKPLIDAHNVKELVDPSLGEDYDIEQVERLLLTASLCVEHSPFLRPRMVQVKEALHEKVVTSSPSLS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0999 472 ProSiteProfiles Protein kinase domain profile. 180 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0999 472 MobiDBLite consensus disorder prediction 1 92 - -
Ahy16g0999 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Ahy16g0999 472 SUPERFAMILY Formin homology 2 domain (FH2 domain) 141 151 - -
Ahy16g0999 472 SUPERFAMILY Protein kinase-like (PK-like) 159 460 IPR011009 -
Ahy16g0999 472 MobiDBLite consensus disorder prediction 124 157 - -
Ahy16g0999 472 MobiDBLite consensus disorder prediction 111 159 - -
Ahy16g0999 472 ProSitePatterns Protein kinases ATP-binding region signature. 186 208 IPR017441 GO:0005524
Ahy16g0999 472 Pfam Protein kinase domain 181 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0999 472 SMART serkin_6 180 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0999 472 MobiDBLite consensus disorder prediction 15 34 - -
Ahy16g0999 472 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 159 457 - -
Ahy16g0999 472 Gene3D Transferase(Phosphotransferase) domain 1 271 468 - -
Ahy16g0999 472 PANTHER OS08G0249100 PROTEIN 159 457 - -
Ahy16g0999 472 Gene3D Phosphorylase Kinase; domain 1 161 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0999 Ahy-Chr16 18050486 18057163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0999 168 460 Trihelix Transcription Factor Family AT1G70460 42.105 7.87e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy16g0999 Pkinase 3.50E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0999 - - aip:107646486 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0288 16 6266527 6268338 Ahy16g0999 16 18050486 18057163 ECH
Ahy12g2552 12 114742050 114748046 Ahy16g0999 16 18050486 18057163 ECH
Ahy11g2492 11 140507164 140509957 Ahy16g0999 16 18050486 18057163 ECH
Ahy14g0360 14 4890919 4893804 Ahy16g0999 16 18050486 18057163 ECH
Ahy16g0999 16 18050486 18057163 Ahy16g0999 16 18050486 18057163 ECH
Ahy16g0999 16 18050486 18057163 Ahy6g0371 6 4551127 4564871 hybridization
Ahy16g0999 16 18050486 18057163 Ahy9g1279 9 38531353 38560920 PCT
Ahy9g1279 9 38531353 38560920 Ahy16g0999 16 18050486 18057163 PCT