Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0985 ATGGAGCAGAAGCTGAAAATTGAATTGAAAAACACGATTAAACAGTTAACATTACATATTCTCCGTTTTCTTCGGAAGCTTCATCCAAGCTGCACACCTTCTTTGACCATTCACCCTTTTAAAACCCCACTCATTCTTCGCACTCTCTCTTTCTATTCCCAAACACTGCATTCACCCTTCACAATGACGAAGGACAAAAACGACCAAACCAGCTCCTTTCTTTTCATTTTCTTCTTCCTTCTCTCCGTTCCGTCAACCTTTGCGCAGAACCAAAATGACGTTTCTAACAATAACAACAACTACAACACGCAGTTCAGCCCTTCGCTCGCGATAATCGTCGTCATTCTCGTTGCAGCACTCTTCCTCATGGGATTCTTCTCCATCTACATCCGCCACTGCGCCGATTCACCCTCCGGCACCGTCCTTCCAACCACGGGAGGCGGAAGGTCCAGAAGAGGGGCACGTGGTCTCGATCCTGCAGTGATCGAGACTTTCCCGATTCTGGAGTATTCGGAGGTCAAGATCCACAAGATTGGAAAAGAGGTTCTTGAATGTGCGGTGTGCCTCTGTGAATTCGAAGACACCGAAACGCTGCGTTTGATTCCCAAGTGTGACCATGTGTTCCATCCGGAGTGCATCGACGAGTGGCTAGCCTCCCACACAACCTGCCCCGTCTGCCGCGCCAACCTCGTCCCGCAACCCGGCGAGTCAGTCCATGCGGTTCCACTCGTGCCAACCACCGATGTCGAGGCGCAAAACGACGCCGTCGTTGACACCGCAGTGCCGGAGGTGCGTGTCAACGTGCCAGACGCTGAGGGAGGAGTCGTGGCGTCGTCGGAGCCGGAAGTGATTGCGATTCCGAAAAGCTTGACGCTGAATCGGAACAGGACGACGCGAGGGTCCAACCGAAGGAGGCAGTTCCCTCGGTCGCACTCGACCGGGCATTCTCTGGTCCAACCGGGAGAGAACACGGACCGGTTCACTTTGAGATTGCCTGTGGCCGTTAGAAGAGAGATAATAAACCGGGAGTTGCAACGGTCTAACAGCTTGTTGGTTTTGCCTAGGGACGGTAGTTCGAGACAGGGAAGTAGTAGGGGAAGGACTTTGAGGCGGTTGGACCGGAGTTTCAAATCCGACCGGTGGGTTTTGACGATGGCGCCACCGTTCTTGGTCAGAGGATCTTCGGTTAGGTCGCCGAAGGTGGTTGATAGCACCGGCGGGGCAGGGGCGGCGTCTTCGTCTACAGCCCCTATTTTGCCGCCGTCGGCCGTTGACTCTGCTCGACCTCCGGTATGA 1296 0.5401 MEQKLKIELKNTIKQLTLHILRFLRKLHPSCTPSLTIHPFKTPLILRTLSFYSQTLHSPFTMTKDKNDQTSSFLFIFFFLLSVPSTFAQNQNDVSNNNNNYNTQFSPSLAIIVVILVAALFLMGFFSIYIRHCADSPSGTVLPTTGGGRSRRGARGLDPAVIETFPILEYSEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPQPGESVHAVPLVPTTDVEAQNDAVVDTAVPEVRVNVPDAEGGVVASSEPEVIAIPKSLTLNRNRTTRGSNRRRQFPRSHSTGHSLVQPGENTDRFTLRLPVAVRREIINRELQRSNSLLVLPRDGSSRQGSSRGRTLRRLDRSFKSDRWVLTMAPPFLVRGSSVRSPKVVDSTGGAGAASSSTAPILPPSAVDSARPPV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0985 431 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 66 374 - -
Ahy16g0985 431 MobiDBLite consensus disorder prediction 295 323 - -
Ahy16g0985 431 MobiDBLite consensus disorder prediction 394 431 - -
Ahy16g0985 431 SUPERFAMILY RING/U-box 184 234 - -
Ahy16g0985 431 Pfam Ring finger domain 184 227 IPR001841 -
Ahy16g0985 431 ProSiteProfiles Zinc finger RING-type profile. 185 227 IPR001841 -
Ahy16g0985 431 SMART ring_2 185 226 IPR001841 -
Ahy16g0985 431 PANTHER RING FINGER DOMAIN-CONTAINING 66 374 - -
Ahy16g0985 431 CDD RING-H2_EL5_like 184 227 - -
Ahy16g0985 431 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 232 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0985 Ahy-Chr16 17730910 17732534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0985 71 406 Rapid Response to Elicitors AT3G05200 46.667 6.17e-91 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0985 K10664 - gmx:100781706 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0985 16 17730910 17732534 Ahy16g0985 16 17730910 17732534 ECH
Ahy16g0985 16 17730910 17732534 Ahy6g0383 6 4802848 4804947 hybridization
Ahy16g0985 16 17730910 17732534 Ahy19g1544 19 45693268 45694715 PCT
Ahy16g0985 16 17730910 17732534 Ahy9g1268 9 36375904 36377330 PCT
Ahy19g1544 19 45693268 45694715 Ahy16g0985 16 17730910 17732534 PCT
Ahy9g1268 9 36375904 36377330 Ahy16g0985 16 17730910 17732534 PCT