Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0965 ATGCAAGATATATTCGGATCAGTTCGGCGATCGCTGGTGTTCCGTGCTTCGCCTGAGAACGAAGAGCACTCGCTGAGAGGAACCCTAGTTGATAAGATCGGTTACTGTATACGCAATTCCAGAGTCTTCTCTAAGCCCTCACTGTCGCCACCGTCCTTGCCGCCGATTCCCAAGGACGTTGCTGCTGCTGCTCCGCCGCCGCCTACGATCCGATGGCGCAAGGGCGAGTTGATCGGTTGCGGCGCCTTTGGCCAAGTTTATGTTGGAATGAATCTCGATTCTGGAGAACTTTTAGCAGTTAAACAGGTTTTGATTGCAGCGAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCATGTAAAAGAGCTCGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTGGGTACAGTTAGAGAGGAGGACACCTTAAATATTCTCCTGGAGTTTGTCCCTGGTGGATCCATATCATCACTGTTGGGGAAATTCGGAGCTTTCCCTGAGGCAGTCATAAGAACTTACACAAAGCAGTTGCTGCTTGGACTTGAGTACTTGCACAAAAATGGAATAATGCACAGAGATATTAAGGGGGCCAACATTCTTGTAGATAATAAAGGTTGCATTAAACTTGCAGATTTTGGGGCCTCCAAACAAGTTGTTGAGCTGGCTACTATTTCGGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAGGTTATTCTCCAGACTGGACATAGCTTCTCTGCTGACATATGGAGTGTGGGTTGCACTGTGATTGAGATGGCCACTGGAAAGCCTCCCTGGAGCCAACAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCGCCAATCCCTGATCATCTCTCTGTTGCAGCCAAAGATTTTCTGCTAAAATGTTTGCAGAAGGAACCATATTTGAGGCCATCGGCATCAGAACTACTGCAGCATCCCTTTGTTACTGGTGAACCTATGGATTCTCTTCCTGTTTCATCTACTGTCGTGAAAAATTTGGAAGCTTCATCTTCTTGTGCTCCAAATGTTGAATCCTTCCTTCGTTGCTCAAATTTGAATCTTGAGGACTCAGGAAATAAAGAGTTATGGGGAATTAGCAACGATGATGATGACATGTGTATGATTGATGACGACGAGGAGTTCTCTCAGAATGATGTCAAACACGAACCTTTGATCTCAGAAAATATTGAGAGCTTCAACCTGATGTCAGATCCCTCTGATGATTGGGTGTGTAAGTTTGATGGAAGTCCGGAATTGGAACATAAAGGAGTCAGTTTTGGCACAGATGAAAATGATAAGTCACTTGGTCACTTAGGGGATTATAACAAGGAGCAGAAAGATTTTTCCTTTCCAAGCGTGCCATCTCTATCAGAGGAAGATGATGAGCTCACGGAGTCAAAAATTCAAGCTTTTTTGGATGAGAAGGCTCTTGAACTGAAGAAGCTGCAGACACCTTTATATGAGGAGTTCTACAACAGTTTAAATATGTCTTGTTCACCAAGTGTGATTGATGGAACAAGTGATGAAACTGCTTCTCGGAAGTTTTTGAAATTACCTCCTAAGAGTAGGTCACCAAGTCGGGTACCAAGCACTCCATCTAAAGCAGCTGACAATACTGGAAGTCCTGGAAGTAATGGCAGGTCCGCATCAACTGTTGGCAATGTAAATGATCATAGTTCACAGGACCTTCCATCTTCTCCCCTTAATGAATTTAAAGGGCTGATAGTTGACTCCCAGCAGGAACCTGGTAGCCCAAGACATTTTACTTTCAGTTTAAGCTTTTCGAAACAGAGAGAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAAAGAAAACGAGAATGGAGGCGCCAAGCAGGGGTGGGGTCAAAGACTTCTTCACCAAAGGATAGAGCTTTACATCGGCAGAGAGAGCGGACACGATTTGCTTCTCCCAGCAAATAA 2001 0.4488 MQDIFGSVRRSLVFRASPENEEHSLRGTLVDKIGYCIRNSRVFSKPSLSPPSLPPIPKDVAAAAPPPPTIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSVAAKDFLLKCLQKEPYLRPSASELLQHPFVTGEPMDSLPVSSTVVKNLEASSSCAPNVESFLRCSNLNLEDSGNKELWGISNDDDDMCMIDDDEEFSQNDVKHEPLISENIESFNLMSDPSDDWVCKFDGSPELEHKGVSFGTDENDKSLGHLGDYNKEQKDFSFPSVPSLSEEDDELTESKIQAFLDEKALELKKLQTPLYEEFYNSLNMSCSPSVIDGTSDETASRKFLKLPPKSRSPSRVPSTPSKAADNTGSPGSNGRSASTVGNVNDHSSQDLPSSPLNEFKGLIVDSQQEPGSPRHFTFSLSFSKQREWKEELDQELERKREWRRQAGVGSKTSSPKDRALHRQRERTRFASPSK* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0965 666 Coils Coil 105 132 - -
Ahy16g0965 666 Coils Coil 617 637 - -
Ahy16g0965 666 MobiDBLite consensus disorder prediction 634 666 - -
Ahy16g0965 666 MobiDBLite consensus disorder prediction 442 481 - -
Ahy16g0965 666 SMART serkin_6 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0965 666 Pfam Protein kinase domain 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0965 666 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Ahy16g0965 666 ProSiteProfiles Protein kinase domain profile. 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0965 666 MobiDBLite consensus disorder prediction 547 587 - -
Ahy16g0965 666 SUPERFAMILY Protein kinase-like (PK-like) 71 336 IPR011009 -
Ahy16g0965 666 MobiDBLite consensus disorder prediction 442 464 - -
Ahy16g0965 666 MobiDBLite consensus disorder prediction 647 666 - -
Ahy16g0965 666 Gene3D Transferase(Phosphotransferase) domain 1 71 364 - -
Ahy16g0965 666 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 1 622 - -
Ahy16g0965 666 MobiDBLite consensus disorder prediction 535 610 - -
Ahy16g0965 666 CDD STKc_MAPKKK 71 335 - -
Ahy16g0965 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Ahy16g0965 666 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0965 Ahy-Chr16 17396569 17401218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0965 1 666 MAP Kinase Kinase Kinase AT1G54960 56.904 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy16g0965 Pkinase 3.20E-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0965 K20606 - gmx:100807537 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0965 16 17396569 17401218 Ahy16g0965 16 17396569 17401218 ECH