Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0962 ATGGAGCCTAAAGTAGATGATGGAGTTAACCAAGGTGGTGGAATTCAAGAGGATCGTAGCGGCGGAACACAGTACGAAACAAACGAGACACCGATTGGAGACGGTAGAAGTGATAGTTGTGATGAATGGGTAGAGGGAGAAGCCACTGAATATCGAGACGTGCTAATGCTGACTGAAGCCGATATGATTAGGAAGGTGTTCTACACGGACGAAGCCGCGTATGAGTTTTACAAGAGATACGGCAAATGCCACGGGTTCGGTATTCGCAAGGGTGATTCGGGAAAGGATGATAATGGCAAGGTGATTAGGAGGAGGTTTTTTTGCAACAAAGCAGGGCTGAGGCAGCGCAAACATTACGAGAGGCTTGACAGGAAGAAGGACCATAGATCGGAGATGCGCACAAACTGTGACGCAAAGCTTTCAATCTTATGGGATGATGTCAGCGAAATTTGGAGGGTTAGAAAAGTTATACTAGATCACAACCATGATTTAACTCCTATGAGGATGGTTCATATGATCAACAGCTTTAGAGACATGGATTGTTCAGCTAAGGCACAGATTAATGGCATGCAGGGACATGGTATTTCCACGTCGAAGATCCTAGGTTATATGGCAGGGCAAGCCGGGGGGTATTCTCTGCTGGGTTTCACAAAAAAGGATGCCTATAACTACATCGAGAAGACCAAGCGGGAGAAGATTGTTGATGGAGACGCTAGCGCCGCAATAATTTATTTAGAGGGAAAAGCAGTGTCGGATCCGATGTGCATGGCTAGGTACAATTTGACGGACAACAATATGTTAGCGAACTTGTTTTGGGCTGATGGTGGGAGCCGGGTTGATTACCAACACTTTGGTGATGTGCTTTCCTTTGATTCGACTTACAAGAAAAACAAATACAGGAGACCTTTGGTTATCTTTTCTGGCTCGAACAATCATAAGAAAACAAGCATATTTGGGTTTGGTTTAGTGTTGGATGAAAGCATTGGGTCATACACGTGGTTGCTTGAAAATTTCTTGGAGGTAATGTGCAACAAAAAGCCATCGGTGATTGTGACAGACGGTTGTGACTCAATGAGGGCAGCAATCAGGGAAGTGTTTCCGGAGGCCACACATAGGCTGTGTGCTTGGCATGTGGAGAAGAACGTGACTTCGAATGTGAAGGATGAAGGCTTAAGACAACTTTTCACTAGGTGGCTGTACTCAAATATGAAGATAGAAGAGTTTGAGGCAGAGTGGGACGCAGCTGTGGTTGAATACCGACTTCACGATAGTTACTGGGATAAGGAAACCTATGATAAGTGGAAAATGTGGGCAAATGCGTACCTGAAAGACAAATTCTACGCCGGGTTCCGCACTACTTCTCAATGTGAAGGGATTAATGCGAATATCAAAAAGTTTCTTAATTCAAGGCACAGTCTTCTTGAGTTGGTGCAGAATGTTGAGTTGATGGTACGAGAGTATCGGAATAACGAGTTAGAAGCCCACTTCAAGTCCATTAATGGCAAGCCAGTGATCACGACTTGCTTGGACCCGCTCGAGCGGTTTGCTGCCGATGTTTACACACGAGAGTTATTCTTGGACGTGAGGAGGGAAATTGTAGGTGTCGGTGCGGTTAACTTCGTCGCAAAGGTTCGCCGATCCACGACTATGGTGTACACAGTTGAAGACTATGGCATTCCGGGTAGGCCATTAACGTTACTCTATGATAGGGTTGTGAATAGGCTACAATGTCCTTGCCAATTTTGGTTGCGAAGCGGTTACCCGTGTCGACACATGTTTTTCGTTTTGAAGCATGAGCATACGAGGGAAATTCCATCAAGGTTGGTGCTGACTAGGTGGCGTAAGGACGCTAAATCATTGGAGAACTATGGTGAAGGAAGAGCTAATGAGTGCAGTGAACGGGGGTTTCTATTACGTCAGGGTGCACTGCACTCAACATCGCAGTGGTTTTCATTCGTAGCTGCACGTAGCCCGGGTTTGTTTAACACAGCGATGAGTGGCATACGAGCTTTATGCAAACAAATCGAGGCTGCATGCGATCAGAAGGGTCCGTCGGCAAAGGGAAGAGATACTCCCACTGTGAAGGATCCCGTGGTGGTAAAGACCAAAGGGGCTCTCCGGATTAAGAAAATGAGTGGTAGGAAGAGGCGTTGTAGCATGTGTCGGAAAGCAGGACACGCGAAGCGACACTGCACCGGCAAGCGGGGATTGAATGTGGAGGCAGACCCACAGGAGGATGGGAAGACAGCAGACTTGGGATCGGAAGGTTCCTCACCAACAGAAAATGCAAAGGGTCGATGTGACACATTGAAAGTGCTCTCACCTAAAGCGGGAGAAGCCTTTGCCGAGTCGGATGTGGAAGAATCTGGGTTCCGGCCAAAAGAGGGGGGTCAGAGTGGGCATATCCGTACCGAAGGTTGGGATTCTGTCCTCCCATTGTGCTATAACGACGACAACTGTGTGAAGATTGAAGAGCTGATGCATGACATAATCAGGGTTACCGAGAGGCTATCAAGTAATCGGAGACAAGTTTGA 2535 0.4702 MEPKVDDGVNQGGGIQEDRSGGTQYETNETPIGDGRSDSCDEWVEGEATEYRDVLMLTEADMIRKVFYTDEAAYEFYKRYGKCHGFGIRKGDSGKDDNGKVIRRRFFCNKAGLRQRKHYERLDRKKDHRSEMRTNCDAKLSILWDDVSEIWRVRKVILDHNHDLTPMRMVHMINSFRDMDCSAKAQINGMQGHGISTSKILGYMAGQAGGYSLLGFTKKDAYNYIEKTKREKIVDGDASAAIIYLEGKAVSDPMCMARYNLTDNNMLANLFWADGGSRVDYQHFGDVLSFDSTYKKNKYRRPLVIFSGSNNHKKTSIFGFGLVLDESIGSYTWLLENFLEVMCNKKPSVIVTDGCDSMRAAIREVFPEATHRLCAWHVEKNVTSNVKDEGLRQLFTRWLYSNMKIEEFEAEWDAAVVEYRLHDSYWDKETYDKWKMWANAYLKDKFYAGFRTTSQCEGINANIKKFLNSRHSLLELVQNVELMVREYRNNELEAHFKSINGKPVITTCLDPLERFAADVYTRELFLDVRREIVGVGAVNFVAKVRRSTTMVYTVEDYGIPGRPLTLLYDRVVNRLQCPCQFWLRSGYPCRHMFFVLKHEHTREIPSRLVLTRWRKDAKSLENYGEGRANECSERGFLLRQGALHSTSQWFSFVAARSPGLFNTAMSGIRALCKQIEAACDQKGPSAKGRDTPTVKDPVVVKTKGALRIKKMSGRKRRCSMCRKAGHAKRHCTGKRGLNVEADPQEDGKTADLGSEGSSPTENAKGRCDTLKVLSPKAGEAFAESDVEESGFRPKEGGQSGHIRTEGWDSVLPLCYNDDNCVKIEELMHDIIRVTERLSSNRRQV* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0962 844 ProSiteProfiles Zinc finger SWIM-type profile. 568 600 IPR007527 GO:0008270
Ahy16g0962 844 MobiDBLite consensus disorder prediction 732 765 - -
Ahy16g0962 844 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 66 634 - -
Ahy16g0962 844 MobiDBLite consensus disorder prediction 16 34 - -
Ahy16g0962 844 MobiDBLite consensus disorder prediction 733 749 - -
Ahy16g0962 844 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 66 634 IPR031052 GO:0006355
Ahy16g0962 844 MobiDBLite consensus disorder prediction 1 39 - -
Ahy16g0962 844 Pfam MULE transposase domain 287 381 IPR018289 -
Ahy16g0962 844 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0962 Ahy-Chr16 17346382 17352672 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g0962 MULE 1.80E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0962 - - ahf:112758792 1735.7