Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0951 ATGTCAAACATCACAAGTTGTGATAGTGGGAGCTTCTCCACAGATAACACTAACAGCAGAGTAGTAGAAGGAGGAGATGCATCACTATTGTTACTTAATAAAAATAAACAGCAATCAGAGTCAGAGATACTTGGTGGTGGTAACTTCCATAGTCCAAATTCTCATTCTTCAACCATCACTACTAATAACAGCAGCAGCAATGCTTCCAACGCAAATTCACAACCACAACCACCACCGCCTCCTAAGAAGAAAAGAAGCCTACCAGGAAATCCAGATCCAAGTGCTGAAGTGATAGCTCTATCGCCAAACACGCTGGTGACTACAAACCGGTTCATATGTGAGATCTGCAACAAAGGTTTCCAAAGGGATCAGAACCTTCAACTTCACCGGAGAGGGCATAACCTGCCATGGAAGCTGAAACAGAGAAGCAGCAGCGAAGTGCGGAAAAGGGTGTACGTGTGTCCCGAAGCGTCGTGTGTCCACCACAATCCTGCTCGAGCACTGGGAGACCTCACCGGAATCAAGAAGCACTTCAGCAGAAAGCACGGCGACAAGAAGTGGAAATGTGACAAATGCAACAAGAAATACGCCGTTCAATCTGACTGGAAAGCTCATTCCAAAATCTGTGGTACCAAAGAATACAAATGTGACTGCGGCACCGTCTTTTCCAGAAGAGATAGCTTCATAACCCACAGAGCTTTCTGTGACGCACTGGCTGATGAGAATAACAAAGTGAACAATGAAGGAGGAGTACTAGGACATTTTCCAAAGATAGGTTCCAACTTATTGCAACCATTAATCCCAAACCTAGTTGCATCATTACCAATCACTCGCAATAACAGTAGTAGTAATAATAGTAACCCACACATTATTTCTACTTCCGAATTCAAGCAGCATCCATCATTCCCTCATGAACTCGTGCCAATGTCAATGCCTGAACAGAAACCCTTCATCAACACCACCACAACCACCAACAACCACCTAATAAACCCTTCATCACTGCCCTCTCTTCAACTGAACTCACCACATTCTCCGCTAAACATGTTCGATGAGAGTGGTGGGGTCCATTTAGCTGCAGGGTTACCTCACATGTCCGCCACGGCATTGCTTCAAAAAGCTGCACAAATGGGTGCAACAAGCGTGAGCAATAATAACAATAACACTAGCATGGCACCCCCGTCATTTGCTTCTTCCAATAATGGGATCATCATGGAACACTTCATGCACAATGCTCATCCTCAACACGATAATATTTCATCGTCTCAGTTTAATAATAACAATAATTTCAACGGGAGCGTTGGAATGAACGGTGTGGAAATGTTTAATGCTATATTGGATCAAAGTAAGGCCTTAGCCAAGATCATTGATCAGAACAACAGAAGCAGTGGATTCAGTATCCCCCCGGTGAGTGGTAGGAGTAGTAGCACCATTAATATTGGTGGAGCTAAGGGAAGTGAGGATGTAATGACTCTCGACTTTCTGGGAATCGGAGCGGGAGGTGCTGGTGGTGGTGGCGGCGCCGGAGATGGTGGTGCCCATGGATACTTTGGTATTGGTCCCTTAGCGTAA 1569 0.4512 MSNITSCDSGSFSTDNTNSRVVEGGDASLLLLNKNKQQSESEILGGGNFHSPNSHSSTITTNNSSSNASNANSQPQPPPPPKKKRSLPGNPDPSAEVIALSPNTLVTTNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSSEVRKRVYVCPEASCVHHNPARALGDLTGIKKHFSRKHGDKKWKCDKCNKKYAVQSDWKAHSKICGTKEYKCDCGTVFSRRDSFITHRAFCDALADENNKVNNEGGVLGHFPKIGSNLLQPLIPNLVASLPITRNNSSSNNSNPHIISTSEFKQHPSFPHELVPMSMPEQKPFINTTTTTNNHLINPSSLPSLQLNSPHSPLNMFDESGGVHLAAGLPHMSATALLQKAAQMGATSVSNNNNNTSMAPPSFASSNNGIIMEHFMHNAHPQHDNISSSQFNNNNNFNGSVGMNGVEMFNAILDQSKALAKIIDQNNRSSGFSIPPVSGRSSSTINIGGAKGSEDVMTLDFLGIGAGGAGGGGGAGDGGAHGYFGIGPLA* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0951 522 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 54 498 - -
Ahy16g0951 522 MobiDBLite consensus disorder prediction 73 87 - -
Ahy16g0951 522 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 54 498 - -
Ahy16g0951 522 Gene3D Classic Zinc Finger 90 160 - -
Ahy16g0951 522 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Ahy16g0951 522 MobiDBLite consensus disorder prediction 41 95 - -
Ahy16g0951 522 Pfam Zinc-finger double-stranded RNA-binding 111 133 IPR022755 -
Ahy16g0951 522 Gene3D Classic Zinc Finger 165 245 - -
Ahy16g0951 522 SUPERFAMILY beta-beta-alpha zinc fingers 110 207 IPR036236 -
Ahy16g0951 522 MobiDBLite consensus disorder prediction 1 21 - -
Ahy16g0951 522 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 133 IPR013087 -
Ahy16g0951 522 MobiDBLite consensus disorder prediction 41 72 - -
Ahy16g0951 522 SMART c2h2final6 187 207 IPR013087 -
Ahy16g0951 522 SMART c2h2final6 152 182 IPR013087 -
Ahy16g0951 522 SMART c2h2final6 111 133 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0951 Ahy-Chr16 17077879 17081879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0951 56 244 IDZ Gene Family AT3G50700 78.307 1.26e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy16g0951 zf-C2H2_jaz 7.70E-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0951 - - gmx:100813556 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0951 16 17077879 17081879 Ahy6g0410 6 5118707 5122558 hybridization
Ahy16g0951 16 17077879 17081879 Ahy19g1487 19 40081469 40088133 PCT
Ahy16g0951 16 17077879 17081879 Ahy9g1203 9 31890686 31897450 PCT