Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0929 ATGATGATGACAATAGAGGGAATGATGGAGAAGGGGGTTCTGGATGACGTCATTAGGAGGCTGCTTGAAGGCAAGGGAGGCAAGCAAGTTCAGCTCTCGGAGTCTGAGATCCGTCAGCTTTGCGTCAACGCCAGACAAATCTTCCTCTCTCAGCCCATCCTCCTCGACCTCCAGGCTCCCATCCGCATCGGCGGTGACATACACGGGCAGTACCAAGACTTGCTGAGGCTTTTCGAATACGGCGGTTATCCTCCCACGGCCAACTACCTCTTCTTGGGGGATTATGTAGACAGAGGCAAGCAGAGCTTGGAGACCATATGCCTGCTTTTGGCCTACAAGATAAGATATCCTGACAAGGTTCACCTGCTCAGAGGAAACCATGAAGACGCGAAAATAAACCGGATATACGGTTTCTACGATGAGTGTAAAAGGAGGTTCAATGTTAGGCTGTGGAAGATATTTACAGATTGCTTTAACTGTTTGCCGGTTGCTGCACTCATTGATGGAAAAATTCTCTGTATGCATGGAGGACTCTCTCCTGAATTGCAAACTTTGGATCAGATAAGGGAGATTTCAAGGCCTACTGAGATTCCAGATAGCGGTCTACTCTGCGATCTGCTCTGGTCCGATCCCGATCCCAGTCTCGACGGTTGGGCAGACAGCGACCGAGGCATTTCCTGCACTTTTGGTCCTAATGCAGTCACCGAGTTTTTGGACAAAAATGATCTTGATCTCGTTTGCAGAGGTCATCAGGTTGTGGAGGATGGATATGAATTTTTCGCTAAACGGCGATTAGTTACCATATTCTCTGCTCCAAATTATGGTGGCGAGTTTGACAATGCTGGTGCATTGTTGAGCGTTGATGAATCTCTTGTTTGTTCCTTTGAGATATTGAAACCGGTGGATAAAGGATCCTCATCAAAGGTCACTCTTAAAAAGCCCCCTAAACTTGGCAAGGTATAG 963 0.4756 MMMTIEGMMEKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDLQAPIRIGGDIHGQYQDLLRLFEYGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKVHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSPELQTLDQIREISRPTEIPDSGLLCDLLWSDPDPSLDGWADSDRGISCTFGPNAVTEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPVDKGSSSKVTLKKPPKLGKV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0929 320 SUPERFAMILY Metallo-dependent phosphatases 27 303 IPR029052 -
Ahy16g0929 320 PRINTS Serine/threonine phosphatase family signature 89 116 IPR006186 GO:0016787
Ahy16g0929 320 PRINTS Serine/threonine phosphatase family signature 185 212 IPR006186 GO:0016787
Ahy16g0929 320 PRINTS Serine/threonine phosphatase family signature 264 280 IPR006186 GO:0016787
Ahy16g0929 320 PRINTS Serine/threonine phosphatase family signature 242 262 IPR006186 GO:0016787
Ahy16g0929 320 PRINTS Serine/threonine phosphatase family signature 122 146 IPR006186 GO:0016787
Ahy16g0929 320 PRINTS Serine/threonine phosphatase family signature 60 87 IPR006186 GO:0016787
Ahy16g0929 320 PRINTS Serine/threonine phosphatase family signature 156 182 IPR006186 GO:0016787
Ahy16g0929 320 Pfam Calcineurin-like phosphoesterase 65 252 IPR004843 GO:0016787
Ahy16g0929 320 ProSitePatterns Serine/threonine specific protein phosphatases signature. 123 128 IPR006186 GO:0016787
Ahy16g0929 320 CDD MPP_PP1_PPKL 13 300 - -
Ahy16g0929 320 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 1 315 - -
Ahy16g0929 320 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 315 - -
Ahy16g0929 320 Gene3D - 7 310 IPR029052 -
Ahy16g0929 320 Pfam Serine-threonine protein phosphatase N-terminal domain 14 58 IPR031675 -
Ahy16g0929 320 SMART pp2a_7 32 302 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0929 Ahy-Chr16 16657573 16659426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0929 55 246 Calmodulin-binding Proteins AT5G63870 34.361 6.88e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0929 K06269 - gmx:100805030 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0929 16 16657573 16659426 Ahy6g0433 6 5319333 5320935 hybridization