Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0919 ATGGCAGCTTCAGATCTATCTATAAGCTTATTATTATTCACTGCCACTATTATTTTCTCCAACTTGGCTTCTCTTGCATCTTCATCTTCCTCCATTTGCGACCTCACACCATATCCATCCTTCTGCAAATCCAATTCACCTTCCAAAGGCCGCAGTGACATACATAGCTATGGTCGATTTTTCGCACGCAAATCCCTCTCATCATCTACTAAGTTTCGCTCATTAGTCTCTAAGTATCTCAAACCTCGTTCCAAAAACAAATTATCTGAGTCCATGCTTCTTGCCCTTCAAGATTGCTACCTTCTAAGTGACTTCAACGTAGATTTCTGGACCAACACTCTCAACGCCATAAATTCCACTAACACACTCAGTAGCTCAGAGGATGAAAATTATTTGCATAGCATGATTAGTGCTACTTTAACCAACCACGACACATGCTTAGATAGCCTCCAACAAGCCACAACCACACACACTGATGAATTACTCATCACCAATATCTCCAATGGGACCAAGTTTTATAGCATATCCCTTGCATTTTTCAAGCAAGGTTGGGGAAACAACAAAAACACACACAACAGAAAATTAACAGAGAGAATAGTAAAGAGAAGTAACATTCATCGCATGTGGGAACAGAGGCTGTATGAGATAACAAAAAGAAGAGGAAGAAAACTGCTTCAGTTAGATCCTGAGGCGAATGTTGTTGTGAGCCAAACGGTGGTGGTGAACCCAGATGGCTCTGGAGACTACACAACTATTAATGATGCAGTGAATGCAGCACCAAACAACACCCTTGGTATCAATGGCTTTTTTGTAATTTATGTGGTTGCAGGGGTGTATGAAGAATATGTTTCCATTCCAAAAACCAAGCAGTATTTAATGATGATAGGTGATGGTATTAACCAGACTATAATCACCGGAAATCGAAGCGTTGCTGATGGCTGGACAACCTTCAACTCTGCCACGTTTGCTGTGGTTGCACAAGGCTTTGTGGCGGTGAACATGACATTTCGGAACACAGCCGGAGCAATAAACCACCAAGCAGTGGCGTTTCGGAGCGGTGCAGATCTATCTGCATTTTATAGCTGTAGCTTTGAAGGGTACCAAGACACATTGTACACGCATTCTATGAGGCAATTCTACAGAAACTGCGACATTTATGGCACTGTGGACTTCATATTTGGCAATGGAGCGGTTGTCTTCCAAGATTGTAACATCTACCCAAGACTACCAATGAGTAATCAATTCAATGCAATCACTGCACAGGGCAGAACTGACGTGAATCAAAACACTGGAATCTCCATACACAATTGCACCATAACGGCCGCAGCCGATTTAGCTGCTAGTAACGGCACCACAAAAACGTACCTAGGGAGGCCATGGAAACTGTATTCAAGAACAGTTTACATGCAATCTTTCATGGATAGCTTGATCGATCCAGCGGGTTGGGTTGCTTGGTCTGGGGACTTTGCCTTAGACACCCTTTATTATGCTGAATATGATAACTGGGGAGCCGGATCAAATACCAGTAGTAGGGTTACTTGGGCAGGTTACGATGTGCTTTTGGACAGCATAGGTGCAATTAATTTTACAGTCTCCAATTTCATATTTGGTGATGTTTGGCTTCCCGCCACTGGAGTACCATATTTAGCTAGTTTATACTGA 1662 0.426 MAASDLSISLLLFTATIIFSNLASLASSSSSICDLTPYPSFCKSNSPSKGRSDIHSYGRFFARKSLSSSTKFRSLVSKYLKPRSKNKLSESMLLALQDCYLLSDFNVDFWTNTLNAINSTNTLSSSEDENYLHSMISATLTNHDTCLDSLQQATTTHTDELLITNISNGTKFYSISLAFFKQGWGNNKNTHNRKLTERIVKRSNIHRMWEQRLYEITKRRGRKLLQLDPEANVVVSQTVVVNPDGSGDYTTINDAVNAAPNNTLGINGFFVIYVVAGVYEEYVSIPKTKQYLMMIGDGINQTIITGNRSVADGWTTFNSATFAVVAQGFVAVNMTFRNTAGAINHQAVAFRSGADLSAFYSCSFEGYQDTLYTHSMRQFYRNCDIYGTVDFIFGNGAVVFQDCNIYPRLPMSNQFNAITAQGRTDVNQNTGISIHNCTITAAADLAASNGTTKTYLGRPWKLYSRTVYMQSFMDSLIDPAGWVAWSGDFALDTLYYAEYDNWGAGSNTSSRVTWAGYDVLLDSIGAINFTVSNFIFGDVWLPATGVPYLASLY* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0919 553 Pfam Plant invertase/pectin methylesterase inhibitor 30 178 IPR006501 GO:0004857
Ahy16g0919 553 Gene3D - 232 552 IPR012334 -
Ahy16g0919 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 182 IPR035513 -
Ahy16g0919 553 PANTHER PECTINESTERASE 10 550 - -
Ahy16g0919 553 SUPERFAMILY Pectin lyase-like 234 549 IPR011050 -
Ahy16g0919 553 CDD PMEI-like_3 32 185 - -
Ahy16g0919 553 Pfam Pectinesterase 239 538 IPR000070 GO:0030599|GO:0042545
Ahy16g0919 553 SMART PMEI_2 24 179 IPR006501 GO:0004857
Ahy16g0919 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Ahy16g0919 553 PANTHER PECTINESTERASE 10 550 - -
Ahy16g0919 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0919 Ahy-Chr16 16497319 16499347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0919 8 552 Carbohydrate Esterase AT4G02330 55.185 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0919 K01051 - gmx:100801141 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0919 16 16497319 16499347 Ahy6g0446 6 5422309 5425331 hybridization
Ahy16g0919 16 16497319 16499347 Ahy19g1444 19 37097514 37101352 PCT
Ahy16g0919 16 16497319 16499347 Ahy9g1167 9 29825607 29829411 PCT