Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0918 ATGGCAATAATTTCAAAGAAGTCCCTAACATTATGCATGTTTTTATGGCAATTTGCATCTCTTGCATTATTATCAGCATCATCTGCTTCTTCCTCCATAGACACAATTTGCAACCTCACACCTCATCCAACATTTTGCAAATCCAATTCCCCTTCTAATGTCCAAGGAGGTGACATTCATGAGTATGGCCGTTTTTACACAAACAAGTCCCTGTCATCGTCAAGGGATGTTCTCTCATTAGTCTCTAGCTACTTACAATCTCCCTCCGAATTCTCCCGGTCAACGATTCTCGCCCTTGAAGATTGCCACCTCTTAGTTGACCTCAACATAGATTTCTGGACCAAGACTCTACAAACTCTAGACACCACAAACAGCACCCTTAATAGTTCCGAGGCTGAAAACCTTCTTACCATGATTAGTGCTACATTAACCAATCTCGATACCTGCTTAGAAAGCCTTAAAGAAGCCACGTCATCAACCCCTGATGACAACCTAGTAAGCTATGTTTCAAACGGAACCATGTTTTCCAGCATATCTCTTGCACTCTTTAAACGGGGATGGGCTTCCAGCACAACCACACAACAGAGTCGAAAGCTGTTTTCTCAAAGAAATGACGCTTACGCGTGGGAACAGAGGGTTTACGAGATAATCAGAAAGAGAGGGAGAAAGCTGCTTCAGAGTGCTCCTGACGGTGTTGTTGTGAACCAAACGGTGGTGGTGAATCCTGATGGGTCTGGAAACTTCACAACTATCAACGATGCGGTGGCTGCGGCACCCAACAACACCGGTGGTGTCAATGGTTTCTTTGTGATTTATGTGGTTGCAGGAGTGTACGAAGAGTATGTATCTATTCCAAAATACAAGCAGTACTTGATGATGATTGGTGATGGTATCAACCAGACCATAATCACCGGCAATCACAGCGCCGGTACTGGCTACACTACCTTCAATTCTTATTCATTTGCTGTGGTTGCGCAAGGATTCGTGGCTATGAATATAACATTTCGCAACACAGCAGGAGCAAGCAATCACCAAGCGGTGGCTCTTAGAAGCGGAGCAGACCTATCCGCATTCTACAATTGCAGCTTCGAAGGGTACCAAGACACTTTGTACACACATTCAATGAGACAATTCTACCGAGATTGCGACATTTACGGCACCATTGACTTCATATTTGGCAACGCAGCAGTTGTGTTGCAAAACTGTAACATTTTGCCACGCCTCCCAATGAGTGGCCAGTACAACACCATCACAGCACAGGGCAGAACTGACATTAACCAAAACACAGGAACATCTGTACACAACTGTACAATAACCGCCGCCACCGACTTGGGCACCACTAAAACGTATCTTGGGAGGCCATGGAAGGAGTATTCAAGAACGGTTTACATACAGTCTTTCATGGACAGTTTGATTGATCCTGCTGGTTGGGCAGAGTGGTCAGGGACATTGTATTTGGACACTCTTTATTATGCGGAATATGATAATTGGGGTCCTGGATCTAACACTAGTAATCGGGTCACTTGGGCAGGCTACCATGTCATTAATGCCACTGATGCAGAGAATTTCACAGTTTCTAATTTCATATCCGGTGCTGCATGGTTACCTCCTACTGGAGTCCCCTACTTTCTTGATTTAATTTGA 1644 0.4459 MAIISKKSLTLCMFLWQFASLALLSASSASSSIDTICNLTPHPTFCKSNSPSNVQGGDIHEYGRFYTNKSLSSSRDVLSLVSSYLQSPSEFSRSTILALEDCHLLVDLNIDFWTKTLQTLDTTNSTLNSSEAENLLTMISATLTNLDTCLESLKEATSSTPDDNLVSYVSNGTMFSSISLALFKRGWASSTTTQQSRKLFSQRNDAYAWEQRVYEIIRKRGRKLLQSAPDGVVVNQTVVVNPDGSGNFTTINDAVAAAPNNTGGVNGFFVIYVVAGVYEEYVSIPKYKQYLMMIGDGINQTIITGNHSAGTGYTTFNSYSFAVVAQGFVAMNITFRNTAGASNHQAVALRSGADLSAFYNCSFEGYQDTLYTHSMRQFYRDCDIYGTIDFIFGNAAVVLQNCNILPRLPMSGQYNTITAQGRTDINQNTGTSVHNCTITAATDLGTTKTYLGRPWKEYSRTVYIQSFMDSLIDPAGWAEWSGTLYLDTLYYAEYDNWGPGSNTSNRVTWAGYHVINATDAENFTVSNFISGAAWLPPTGVPYFLDLI* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0918 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 185 IPR035513 -
Ahy16g0918 547 SUPERFAMILY Pectin lyase-like 233 544 IPR011050 -
Ahy16g0918 547 SMART PMEI_2 28 182 IPR006501 GO:0004857
Ahy16g0918 547 Gene3D - 231 546 IPR012334 -
Ahy16g0918 547 PANTHER PECTINESTERASE 13 543 - -
Ahy16g0918 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 185 IPR035513 -
Ahy16g0918 547 PANTHER PECTINESTERASE 13 543 - -
Ahy16g0918 547 Pfam Pectinesterase 238 531 IPR000070 GO:0030599|GO:0042545
Ahy16g0918 547 CDD PMEI-like_3 35 188 - -
Ahy16g0918 547 Pfam Plant invertase/pectin methylesterase inhibitor 32 182 IPR006501 GO:0004857
Ahy16g0918 547 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Ahy16g0918 547 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0918 Ahy-Chr16 16446070 16449953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0918 9 547 Carbohydrate Esterase AT4G02330 51.748 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0918 K01051 - gmx:100801141 770