Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0909 ATGAGCAAGGGTGAATTATCATCAAGGACAAGGATGAAAGCTCCGCCGGTTGCGTTGGCGACTCTGATTGGCCGTGAGCTTCGAAATGATAAAGTTGAGAAGCCTTTTGTGAAGTACGGGCAAGCTGGCTTGGCCAAGAAAGGAGAAGATTACTACCTAATTAAGACAGATTGCCAGAGGATTCCTGGGGATCAATCGACAGCGTTTTCTGTCTTCGCGATATTCGATGGGCATAATGGTATATCAGCTGCTATTTTTGCAAAGGAAAACTTGCTAAACAATGTTCTGAGTGCAATACCGCAAGACATCAGCAGGGATTCGTGGCTTCAGGCTCTTCCTCGCGCCCTTGTTGTTGGTTTTGTGAAAACTGACATAGAATTTCAGCAAAAGGGAGAAACTTCTGGAACAACTGCTACGTTTGTTCTGATTGATGGATGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGCTGCATTCTAGATACTCAGGGAGGTGTAGTTTCTCTCTTGACAGTTGACCACAGACTAGAAGAGAATGAAGAAGAGAGGCAGCGCGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTTTTTGGAGGCAATGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGATCAATAGGTGATACAGATGTTGGAGAATTTATTGTGCCAATACCGCATGTTAAGCAAGTGAAGCTGTCAAATGCTGGCGGAAGGCTTATCATAGCTTCTGATGGCATTTGGGATGCTTTATCTTCTGATATGGCTGCCAACTCATGTCGGGGTCTACCTGCAGAGCTTGCAGCAAAGCTAGTGGTTAAGGAAGCTCTAAGGTCCAGAGGCCTGAAGGATGATACAACATGCCTTGTTGTAGATATTATTCCTTCTGACCTTCCTGTATTACCACCAATTCCAAGAAAGAAACATAATATGCTAACTTCGATTCTCTTTGGAAAGAAATCTGAGAATTCCTCGAACAAATCTACTAATAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGCTCTGCAATGCTTGCTGAAAGGCTGGGTAAGGATTTCCCGTTGAATAAGAATTCTGGGATTTTTCGCTGTGCTGTTTGCCAGGTGGATCAAACACCTGGTGACAGCTTATCTGTAAACTCCGGCCATTTTTTCACTCCAGCATCTAAACCATGGGAAGGTCCATTCCTCTGCACAAATTGTCGGAAGAAGAAAGATGCTATGGAAGGAAAAAGACCCACAGTGACAGCATAA 1287 0.4499 MSKGELSSRTRMKAPPVALATLIGRELRNDKVEKPFVKYGQAGLAKKGEDYYLIKTDCQRIPGDQSTAFSVFAIFDGHNGISAAIFAKENLLNNVLSAIPQDISRDSWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERQRVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAANSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPRKKHNMLTSILFGKKSENSSNKSTNKLSAVGVVEELFEEGSAMLAERLGKDFPLNKNSGIFRCAVCQVDQTPGDSLSVNSGHFFTPASKPWEGPFLCTNCRKKKDAMEGKRPTVTA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0909 428 Pfam Protein phosphatase 2C 65 282 IPR001932 -
Ahy16g0909 428 SMART PP2C_SIG_2 54 300 IPR001932 -
Ahy16g0909 428 Gene3D - 36 304 IPR036457 -
Ahy16g0909 428 ProSiteProfiles PPM-type phosphatase domain profile. 35 300 IPR001932 -
Ahy16g0909 428 SUPERFAMILY PP2C-like 41 300 IPR036457 -
Ahy16g0909 428 CDD PP2Cc 46 300 IPR001932 -
Ahy16g0909 428 PANTHER ALPHABET, ISOFORM E-RELATED 8 426 - -
Ahy16g0909 428 SMART PP2C_4 26 298 IPR001932 -
Ahy16g0909 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 8 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0909 Ahy-Chr16 16284999 16288380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0909 6 425 PP2C-type Phosphatase Gene Family AT1G09160 77.143 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0909 - - gmx:100807886 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0909 16 16284999 16288380 Ahy16g0909 16 16284999 16288380 ECH
Ahy16g0909 16 16284999 16288380 Ahy6g0455 6 5555222 5558613 hybridization