Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0904 ATGGTAATGATGGATCTCAACAAGGAATGGGTGTGTGAGAGCAAGAAGTGTTGTAGTGATTGCAAGACCACCAAGACTCCACTGTGGAGAGGAGGACCTGCTGGTCCCAAGAGTCTTTGCAACGCGTGCGGAATAAGGTACCGGAAGAGAAGGGCTTCAGCGGTGGGAATGAGAAAAGGACAAGAGAGGAAGAGAGAGAGATCACAAAATGGCGGTGGCAGCAGCTCCTCTACCTCCTCCTCTGATAACGAGTTGAAGGAGTCGTTGAAAGTGAATTTGATGGCGTTGGGTGAGGAGTTTTGGTTGCTAAAGAAGAAACAGAGGAGTATGTGTTTGTTGGGGGAAGAGGAACAAGCCGCTGTGTGTTTAATGGCACTCTCTTGTGGCTATGTTTTTGCTTAA 402 0.4826 MVMMDLNKEWVCESKKCCSDCKTTKTPLWRGGPAGPKSLCNACGIRYRKRRASAVGMRKGQERKRERSQNGGGSSSSTSSSDNELKESLKVNLMALGEEFWLLKKKQRSMCLLGEEEQAAVCLMALSCGYVFA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0904 133 PANTHER GATA TRANSCRIPTION FACTOR 16 7 133 - -
Ahy16g0904 133 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 14 51 - -
Ahy16g0904 133 MobiDBLite consensus disorder prediction 55 69 - -
Ahy16g0904 133 ProSiteProfiles GATA-type zinc finger domain profile. 18 48 IPR000679 GO:0006355|GO:0043565
Ahy16g0904 133 SMART GATA_3 12 62 IPR000679 GO:0006355|GO:0043565
Ahy16g0904 133 PANTHER OS01G0976800 PROTEIN 7 133 - -
Ahy16g0904 133 MobiDBLite consensus disorder prediction 51 84 - -
Ahy16g0904 133 CDD ZnF_GATA 18 69 IPR000679 GO:0006355|GO:0043565
Ahy16g0904 133 Pfam GATA zinc finger 18 51 IPR000679 GO:0006355|GO:0043565
Ahy16g0904 133 Gene3D - 13 74 IPR013088 GO:0006355|GO:0008270
Ahy16g0904 133 MobiDBLite consensus disorder prediction 70 84 - -
Ahy16g0904 133 ProSitePatterns GATA-type zinc finger domain. 18 43 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0904 Ahy-Chr16 16199616 16200720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0904 3 133 C2C2-Gata Transcription Factor Family AT5G49300 51.880 4.48e-33 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Ahy16g0904 GATA 1.20E-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0904 - - lang:109330084 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2617 11 142387981 142389041 Ahy16g0904 16 16199616 16200720 ECH
Ahy16g0904 16 16199616 16200720 Ahy16g0904 16 16199616 16200720 ECH
Ahy16g0904 16 16199616 16200720 Ahy6g0460 6 5609915 5610947 hybridization