LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy16g0899	ATGGCACCAAACAAGAGAGGATCATTAAGCGATGAGGGTAATGATGAGAGAGACCTTCAGCTCCCTCTTTGTAAACGAAAAGCAGCACTACCAGACACCCGGTACCTCTCTTCTCTTGATTCCACCAATCACATGGCGTTGATCTTGGAACCTGTAATTCGGAAAGTGTTACAGGAGATGATGCCACCTATGCTAGAACAGGTGATGCCACGTATGCTGGAACAGGTGATTCCACCTATACTGCAGCGTTACCTACCTTCTCCATGTGATGGATTATCGGTCAGGGGGCAGATTAGTCCAGCAGCTGGTAGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTGCAACCATTTTCACACAGATCAGCATCACAGCAGAGGACAGTTCTCCGCTCCAGGTTGCAGTGTGTGATGCCACAATTCAGAACATCAAGGTAACGAACTCCTTGAAGGTCCAGCTGTGTGTCCTGAAGGGTGATTTTGAAAGTGAGGATTGGACTGCTGAGGAATTCAATAGCAACATAGAAAGTCCAAGAGAAGGAAAAGGACCATTACTCAAGGGAGACACGGTTATTACCATGGAAAATGGAGTTGGCTTTTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACAAGAAGCGGCAAGTTCCGGCTTGGAATTAAGGTACTGTCATCGAATTCATCCCCTGCAGCAGACATCAAGGAAGCAAGAAGCGAGCGTATAAGGGTGAAGGATAAGCGAGGAGTGGCAAATGAGAAACCGGATCGTCCTTCGTTGGATGACAAGGTGAGTTGTCTACGTAAGATAGCGAAAAATGGTCCGATCCGCAAGCAGCTGTCCTCGAATGGAATCAAAACTGTCAAGGATCTGTTGCGCTTGCTCACAACTGACCAAGCTTCACTAAAACAGAAAACCGGCCACATTCCGGGGAAGTCGTGGGAGAAGATTATTGAGCATGCCAAGTCTTGTGCCATAGATAATGATGAGCGCTACATCTATCAGTATTTCGCAGGAACAGCAGAGCAACCAATAGCAGCATCCCTTGTCTTAAATTGCATCTATGAGCCTGTGGCGATTTCATTTGATGGCCAAAATTTTTGCAGCCTAGAGTCTTTGAGTTCGGAAGGCAAGACTTGTGCATGTGAATGGCAGCGTTGGGTGGAAACTGCAAAGCGGCAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTGGCGCAAGTTCAGCGGGTCAATCTCTGGAAAACTTTGATTTCCCAGTTTCTCATCAGCAAGGGCAAGGAGTAGGGCAAGCACAAATGGTTCAAGCATCGGCATCGACAGCATCATATATTGGTGAAGGCGCACAGAGTGTTAACGAGCAAGTAGGGTGTTCCAGTCAACATCAGGTGGGATGGGAAGAGTTCGTTGACGATAGCGGATGGAGCAACATCAGCATGAATGCAATACAGGTTGATCCGTATCCAAATTACTCGGACCCAGTTTACCCCTCTTACTATGTTGGAGGTGATTATGGGGCAACATCATCCAACGATTCATTCCCTATCTTTGATGTTCATTATTCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAAATCCGAACTGCTGTCATTCGTAATGTTCTTAAATGGGCCATTCTCTATGCCGCCAAAAGGAAGCCCAAGCTTCTTGTTCCCTATCAGTAA	1698	0.4647	MAPNKRGSLSDEGNDERDLQLPLCKRKAALPDTRYLSSLDSTNHMALILEPVIRKVLQEMMPPMLEQVMPRMLEQVIPPILQRYLPSPCDGLSVRGQISPAAGRGRSLQLCLMKGLPATIFTQISITAEDSSPLQVAVCDATIQNIKVTNSLKVQLCVLKGDFESEDWTAEEFNSNIESPREGKGPLLKGDTVITMENGVGFFKNVEFTDNSCWTRSGKFRLGIKVLSSNSSPAADIKEARSERIRVKDKRGVANEKPDRPSLDDKVSCLRKIAKNGPIRKQLSSNGIKTVKDLLRLLTTDQASLKQKTGHIPGKSWEKIIEHAKSCAIDNDERYIYQYFAGTAEQPIAASLVLNCIYEPVAISFDGQNFCSLESLSSEGKTCACEWQRWVETAKRQAYKNLKDLKPFGASSAGQSLENFDFPVSHQQGQGVGQAQMVQASASTASYIGEGAQSVNEQVGCSSQHQVGWEEFVDDSGWSNISMNAIQVDPYPNYSDPVYPSYYVGGDYGATSSNDSFPIFDVHYSSKGGCNTVWAKIRTAVIRNVLKWAILYAAKRKPKLLVPYQ*	566

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy16g0899	565	Pfam	Calmodulin binding protein central domain	262	327	IPR046830	-
	Ahy16g0899	565	PANTHER	OS02G0177800 PROTEIN	28	555	IPR012416	GO:0005516
	Ahy16g0899	565	Pfam	Calmodulin binding protein C-terminal domain	351	407	IPR046829	-
	Ahy16g0899	565	PANTHER	CALMODULIN-BINDING PROTEIN 60 G	28	555	-	-
	Ahy16g0899	565	Pfam	Calmodulin binding protein-like N-terminal domain	108	250	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy16g0899	Ahy-Chr16	16087802	16090700	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy16g0899	47	405	Calmodulin-binding Proteins	AT5G26920	35.326	3.87e-58	198

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy16g0899	-		-	aip:107645943	1128.62