Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0880 ATGTCATCTCTGCAACCGAACGTCGATTCTACAAATTCGGAAGCGATGCAACGATCCAATCCCAAGAAGCGCCGGAAAATTGGACACAGCAATTCCCTCAGCCTCGTTCCATGGAGATCCGAGACGCAACAGCGGATCTACTCTTCCAAGCTCGCAGAAGCTCTCCGCCACGTCATCCATCGGAACCCTCCGTCTCCGCCGGCAAAGTCTAGTGCCGGTCGAGAGGTTCGCGAGACCGCCGACCGAGTCCTCGCTTCCACTGCAAAAGGCCGGACTCGTTGGAGCCGCGCTATCCTTGCTAGTCCACTCAACCGGTGGAAGCTCCGGCGGATGCACAAGAAGGTTCACAAGGCCTCCACCGGATTGCCGAAGAAGTCGCCGGAGACTCGCCGGAGATTACCGGTGGTGCAGAAGAAAGCGCGCGTTCTCGGCCGGTTAGTCCCCGGCTGCCGGAAGCTCACGTTCCCGAACCTTCTAGAAGAAGCCACAGACTACATCTCGGCGTTGGAGATGCAGGTGAGAGCCATGACGGCACTCACGGAGTTACTCACCGGCGGCGGCTCCCTCGCCTCGGCTTGA 579 0.5941 MSSLQPNVDSTNSEAMQRSNPKKRRKIGHSNSLSLVPWRSETQQRIYSSKLAEALRHVIHRNPPSPPAKSSAGREVRETADRVLASTAKGRTRWSRAILASPLNRWKLRRMHKKVHKASTGLPKKSPETRRRLPVVQKKARVLGRLVPGCRKLTFPNLLEEATDYISALEMQVRAMTALTELLTGGGSLASA* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0880 192 MobiDBLite consensus disorder prediction 1 35 - -
Ahy16g0880 192 CDD bHLH_AtIBH1_like 130 180 IPR044549 GO:0006355
Ahy16g0880 192 MobiDBLite consensus disorder prediction 59 78 - -
Ahy16g0880 192 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 185 IPR044660 GO:0006355
Ahy16g0880 192 MobiDBLite consensus disorder prediction 1 17 - -
Ahy16g0880 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
Ahy16g0880 192 PANTHER TRANSCRIPTION FACTOR BHLH149 15 185 - -
Ahy16g0880 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 184 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0880 Ahy-Chr16 15743906 15744858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0880 1 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.361 2.38e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0880 - - aprc:113873135 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0880 16 15743906 15744858 Ahy16g0880 16 15743906 15744858 ECH
Ahy16g0880 16 15743906 15744858 Ahy6g0480 6 5882333 5883275 hybridization
Ahy16g0880 16 15743906 15744858 Ahy19g1377 19 30747191 30748266 PCT
Ahy16g0880 16 15743906 15744858 Ahy9g1100 9 24433759 24434798 PCT
Ahy19g1377 19 30747191 30748266 Ahy16g0880 16 15743906 15744858 PCT
Ahy9g1100 9 24433759 24434798 Ahy16g0880 16 15743906 15744858 PCT