Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0869 ATGGCGAGAGGTCTCATTCCAGTGTTATCAATGATTCTTGTTCAGTTGGCGTATGCAGGGATGAGTATTACCTCAAAGCTTGCCATAGAAGGTGGCATGAACCCTCTTATCCTTGTTGCTTATCGTCAAATCTTTGCCACTATTGCCATTGCTCCCTTCACTTATTGGCTCGAATGGAAAACAGTTCCGAGGATGACAAGGCGCGTTATGCTCCAAATAGTACTTTCTTCCATAACAGGAATAACAGGAAACCAGGTTCTGTTCTTCGTGGGTCTAAAATATTCAACTGCCACAGTTGCGTGTGCACTCACCAATTTGCTCCCAGCTTTTACGTTTGTCCTGGCAGCCATCTTCAGACAAGAGAGTGTGGGAATGAAGAGCAAAGCAGGGGTAGGAAAGGTGTTAGGAACAGTATTGTGTGTAGGTGGAGCACTGCTTTTATCATTCTACCACGGCAAAACAATTGGTATAGCAGAATCAAGCATTCGTTGGAGCTTTGCGGAGAGAATGGAAGGAAGAAGCAGCTCCAACGGGAACGAAAGCGCGCTTCTGGGTCCTTTTCTTCTTGTGTTTAGTGCCCTTGTTTGGTCACTTTGGTTCATAATTCAAGCAGACATAAGCAAGAATTTCCCTGCTCCATATACGAGCACAAACTACATGTGTTTCTTGGCCAGCATCCAGTGTGTCCTTCTTGCCTTGTCTTTTGACCATACCCCCTCTTCTTGGTCCCTTCATGATCCTATCAGACTTGTCTCTTCTCTTTATGCGGGGGTAGTTTGCACTGGTCTAGCGTACTGTCTCATGTCATGGACCATTGAGAGGAAAGGTCCTTTGTACGTTTCAGTATTTAGTCCATTGCAACTTGTTCTCACTGCTGTTGCTAGCTGGGCATTGCTTCGGGAGAAACTATACATTGGAACTGTGATAGGGTCTGTGCTGATAGTTGGAGGGCTATATTGTGTTCTATGGGGAAAGAACAAAGAGATGAACGAGATCATTGCTGAAAAAGAGACAATCAAGTACAACGAGAGTAATGCAAAGAATAGTGATTTGGAGTTACCATCTTACATACCATCCAACAATGGTAATCATCTTGTAATTGTGGATGTTGCTTAA 1116 0.4409 MARGLIPVLSMILVQLAYAGMSITSKLAIEGGMNPLILVAYRQIFATIAIAPFTYWLEWKTVPRMTRRVMLQIVLSSITGITGNQVLFFVGLKYSTATVACALTNLLPAFTFVLAAIFRQESVGMKSKAGVGKVLGTVLCVGGALLLSFYHGKTIGIAESSIRWSFAERMEGRSSSNGNESALLGPFLLVFSALVWSLWFIIQADISKNFPAPYTSTNYMCFLASIQCVLLALSFDHTPSSWSLHDPIRLVSSLYAGVVCTGLAYCLMSWTIERKGPLYVSVFSPLQLVLTAVASWALLREKLYIGTVIGSVLIVGGLYCVLWGKNKEMNEIIAEKETIKYNESNAKNSDLELPSYIPSNNGNHLVIVDVA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0869 371 Pfam EamA-like transporter family 6 148 IPR000620 GO:0016020|GO:0016021
Ahy16g0869 371 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Ahy16g0869 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 327 - -
Ahy16g0869 371 PANTHER WAT1-RELATED PROTEIN 6 341 - -
Ahy16g0869 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 150 - -
Ahy16g0869 371 PANTHER WAT1-RELATED PROTEIN 6 341 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0869 Ahy-Chr16 15564659 15568669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0869 5 363 Nodulin-like Gene Family AT1G09380 56.749 4.14e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0869 - - gmx:100801512 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0869 16 15564659 15568669 Ahy6g0488 6 5972381 5976289 hybridization